RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 Q8N402 240 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 OR2T33Q8NG76 320 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 DAZLQ92904 295 aaKnown RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 RELTQ969Z4 430 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 VRK1Q99986 396 aaPredicted RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 MED20Q9H944 212 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 KRCC1Q9NPI7 259 aaPredicted RBP10.49□□□□□ -0.73
CLN6-217ENST00000636964 ZFP57Q9NU63 452 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 KCNMB2Q9Y691 235 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 ADAMTS20P59510 1910 aa10.49□□□□□ -0.73
CLN6-217ENST00000636964 A0A1B0GV90 55 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 WRBO00258 174 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SURF4O15260 269 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 TOX3O15405 576 aaPredicted RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 TFPIP10646 304 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CXCL3P19876 107 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLN6-217ENST00000636964 LGALSLQ3ZCW2 172 aaPredicted RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 DTWD2Q8NBA8 298 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 OR52I1Q8NGK6 324 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 DNAJA3Q96EY1 480 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 TNFRSF13CQ96RJ3 184 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 KATNB1Q9BVA0 655 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 DPCDQ9BVM2 203 aaPredicted RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 TRIM2Q9C040 744 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 UBQLN4Q9NRR5 601 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 C14orf105Q9NVL8 296 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 PCDHGA9Q9Y5G4 932 aaKnown RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 ZC3H12DA2A288 527 aaKnown RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 M0R296 226 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 LANCL1O43813 399 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 ICOSLGO75144 302 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SLC43A1O75387 559 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SLC2A2P11168 524 aaPredicted RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 BMP7P18075 431 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SLC3A1Q07837 685 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 EBPQ15125 230 aaKnown RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 SPHARQ15513 63 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 GXYLT1Q4G148 440 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CNIH2Q6PI25 160 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 ZNF550Q7Z398 422 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 RNF113BQ8IZP6 322 aaKnown RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 GHDCQ8N2G8 530 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 C10orf53Q8N6V4 93 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 LRRC17Q8N6Y2 441 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 GTF3AQ92664 365 aaKnown RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 ZNF524Q96C55 264 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 RNFT2Q96EX2 444 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 REG4Q9BYZ8 158 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SRPK3Q9UPE1 567 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CHTOPQ9Y3Y2 248 aaKnown RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 IDSB3KWA1 339 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SCDO00767 359 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 HPGDSO60760 199 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CCDC157Q569K6 752 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 OAFQ86UD1 273 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 ADGRG3Q86Y34 549 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CPOQ8IVL8 374 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 DMRTC2Q8IXT2 367 aaPredicted RBP10.48□□□□□ -0.73
CLN6-217ENST00000636964 OR5M3Q8NGP4 307 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 CEP76Q8TAP6 659 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 NAT6Q93015 286 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 IFT27Q9BW83 186 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SPACA1Q9HBV2 294 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 KLHL9Q9P2J3 617 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 COPS7AQ9UBW8 275 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 SEC14L4Q9UDX3 406 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 GVINP1Q7Z2Y8 2422 aa10.48□□□□□ -0.73
CLN6-217ENST00000636964 FAM240BA0A1B0GVZ2 78 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 SOCS6O14544 535 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 KHNYNO15037 678 aaKnown RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 PIPP12273 146 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 TBXA2RP21731 343 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 NOS3P29474 1203 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 PSMD4P55036 377 aaKnown RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 FLI1Q01543 452 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 GRK1Q15835 563 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 KLHL22Q53GT1 634 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 CLLU1Q5K131 121 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 C1orf185Q5T7R7 199 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 MEDAGQ5VYS4 303 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 C3orf33Q6P1S2 294 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 ULK3Q6PHR2 472 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 MRGPREQ86SM8 312 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 OR4F15Q8NGB8 312 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 OR52L1Q8NGH7 329 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 OR9Q1Q8NGQ5 310 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 ST8SIA4Q92187 359 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 TMEM43Q9BTV4 400 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 POLR2J2Q9GZM3 115 aaKnown RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 HINT3Q9NQE9 182 aaKnown RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 EXTL2Q9UBQ6 330 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 SIGLEC7Q9Y286 467 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 SHISA3A0PJX4 238 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 FRG2CA6NGY1 282 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 PRODHO43272 600 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 CRTAPO75718 401 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 PSMA1P25786 263 aaKnown RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 IL12BP29460 328 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms