RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 BMP5P22003 454 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 APEX1P27695 318 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GMPRP36959 345 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ETV3P41162 512 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 RGRP47804 291 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GIPRP48546 466 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 INHBCP55103 352 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CARD18P57730 90 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 MS4A2Q01362 244 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 EIF4HQ15056 248 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 C22orf39Q6P5X5 142 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 Q6ZVU0 165 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ATOH1Q92858 354 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CAPNS2Q96L46 248 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 EBF1Q9UH73 591 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 MYO3AQ8NEV4 1616 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DS1A0A191URI9 304 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR7C2O60412 319 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SLC16A7O60669 478 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DNAL4O96015 105 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CD82P27701 267 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TNFRSF4P43489 277 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DS4P43632 304 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DSC1Q08554 894 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DS1Q14954 304 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 P2RY14Q15391 338 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 HES3Q5TGS1 186 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR4C11Q6IEV9 310 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GDPGP1Q6ZNW5 385 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 MOB3CQ70IA8 216 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DOLPP1Q86YN1 238 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 NAGSQ8N159 534 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DTWD1Q8N5C7 304 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ASB16Q96NS5 453 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SMIM3Q9BZL3 60 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PLEKHA2Q9HB19 425 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SLC6A20Q9NP91 592 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PRDM4Q9UKN5 801 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM72A0PK05 275 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GPR171O14626 319 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SEMA4FO95754 770 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR5AL1P0C617 328 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 GPR4P46093 362 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR7A5Q15622 319 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR4F3Q6IEY1 312 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 NKAIN3Q8N8D7 197 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR2AK2Q8NG84 335 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ZBTB8AQ96BR9 441 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PEX11GQ96HA9 241 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DPH7Q9BTV6 452 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 VN1R3Q9BXE9 311 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SLC12A9Q9BXP2 914 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CPEB1Q9BZB8 566 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TWSG1Q9GZX9 223 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PAQR5Q9NXK6 330 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 KPTNQ9Y664 436 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 NUP153P49790 1475 aaKnown RBP5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM235A6NFC5 223 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 AQP7P3A6NL99 342 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 FABP7O15540 132 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ABHD16AO95870 558 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 ONECUT2O95948 504 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SMPD1P17405 629 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 SYN1P17600 705 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 HTR2CP28335 458 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 MAP2K6P52564 334 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 RAB1AP62820 205 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 TP53I3Q53FA7 332 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR14A16Q8NHC5 309 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CREB3L4Q8TEY5 395 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 RNF141Q8WVD5 230 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 MOB3AQ96BX8 217 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CTRCQ99895 268 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 DHRS4Q9BTZ2 278 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 POFUT1Q9H488 388 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OR1A1Q9P1Q5 309 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 OARD1Q9Y530 152 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 CACNG2Q9Y698 323 aa5.61□□□□□ -1.51
SCN1A-212ENST00000636194 PRDM15P57071 1507 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OMGP23515 440 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 TIA1P31483 386 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 KCNQ1P51787 676 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SRSF9Q13242 221 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PSAPL1Q6NUJ1 521 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 GABRG1Q8N1C3 465 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SLC35C1Q96A29 364 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ISG20Q96AZ6 181 aaKnown RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 DNAJA3Q96EY1 480 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 P2RY12Q9H244 342 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FKBP11Q9NYL4 201 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PTTG3PQ9NZH4 202 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 KCNK6Q9Y257 313 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SOWAHBA6NEL2 793 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FIGNL2A6NMB9 653 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 E5RGE8 158 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PRAMEF26H0Y7S4 382 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 RAB27BO00194 218 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 TO15178 435 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 CPEP16870 476 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZXDBP98169 803 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms