RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 ITGA10O75578 1167 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 ADRB1P08588 477 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 IL11P20809 199 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 GBX2P52951 348 aaPredicted RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 TRIM16LQ309B1 348 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 PLPPR5Q32ZL2 321 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 DCAF12Q5T6F0 453 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 OR11G2Q8NGC1 345 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 MFSD8Q8NHS3 518 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 POC1BQ8TC44 478 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 RNF166Q96A37 237 aaPredicted RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 SMIM19Q96E16 107 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 MRPL48Q96GC5 212 aaKnown RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 CCDC32Q9BV29 185 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 MARCH7Q9H992 704 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 SRA1Q9HD15 236 aaKnown RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 VDAC3Q9Y277 283 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 CHCHD2Q9Y6H1 151 aaPredicted RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 ARHGEF9O43307 516 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 STK17BO94768 372 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 GTF2E2P29084 291 aaKnown RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 ACVR1BP36896 505 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 PSMD7P51665 324 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 MAP2K6P52564 334 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 SIRPAP78324 504 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 ZP4Q12836 540 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 CCDC58Q4VC31 144 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 RPL22L1Q6P5R6 122 aaKnown RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 TMEM81Q6P7N7 255 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 DHRS13Q6UX07 377 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 CDC20BQ86Y33 519 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 MS4A15Q8N5U1 240 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 OR2M3Q8NG83 312 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 GHSRQ92847 366 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 NTNG2Q96CW9 530 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 ARL5BQ96KC2 179 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 MRGPRX4Q96LA9 322 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 FRMD6Q96NE9 622 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 ATF6BQ99941 703 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 SYT4Q9H2B2 425 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 ACOXLQ9NUZ1 547 aa17.71■□□□□ 0.43
TREX1-205ENST00000625293 VSX1Q9NZR4 365 aaPredicted RBP17.71■□□□□ 0.43
TREX1-205ENST00000625293 EFNA2O43921 213 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 FOLR3P41439 243 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 MFSD13AQ14CX5 517 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 NR2C2APQ86WQ0 139 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 EGFL6Q8IUX8 553 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 PM20D2Q8IYS1 436 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 FADS6Q8N9I5 356 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 SCAIQ8N9R8 606 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 TEX19Q8NA77 164 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 ABTB1Q969K4 478 aaPredicted RBP17.7■□□□□ 0.42
TREX1-205ENST00000625293 POTEKPQ9BYX7 375 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 GNG8Q9UK08 70 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 KLHDC2Q9Y2U9 406 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 FKBP7Q9Y680 259 aa17.7■□□□□ 0.42
TREX1-205ENST00000625293 PRSS37A4D1T9 235 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 NCR1O76036 304 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 DLGAP3O95886 979 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 PLGP00747 810 aaPredicted RBP17.69■□□□□ 0.42
TREX1-205ENST00000625293 IMPDH2P12268 514 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 CFL1P23528 166 aaKnown RBP17.69■□□□□ 0.42
TREX1-205ENST00000625293 ZNF79Q15937 498 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 GLYR1Q49A26 553 aaPredicted RBP17.69■□□□□ 0.42
TREX1-205ENST00000625293 DDI2Q5TDH0 399 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 NDUFAF7Q7L592 441 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 ARMC10Q8N2F6 343 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 DDIT4LQ96D03 193 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 WASF3Q9UPY6 502 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 CPAMD8Q8IZJ3 1885 aa17.69■□□□□ 0.42
TREX1-205ENST00000625293 PMS2P1A4D2B8 440 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 SHISA8B8ZZ34 492 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 MS4A18H0YCH9 400 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 XKRYO14609 159 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 TRIM3O75382 744 aaPredicted RBP17.68■□□□□ 0.42
TREX1-205ENST00000625293 ABHD16AO95870 558 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 IGHEP01854 428 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 AHCYP23526 432 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 SHC1P29353 583 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 GDI2P50395 445 aaKnown RBP17.68■□□□□ 0.42
TREX1-205ENST00000625293 ZNF41P51814 821 aaPredicted RBP17.68■□□□□ 0.42
TREX1-205ENST00000625293 RPS11P62280 158 aaKnown RBP eCLIP17.68■□□□□ 0.42
TREX1-205ENST00000625293 INSM1Q01101 510 aaPredicted RBP17.68■□□□□ 0.42
TREX1-205ENST00000625293 SNTA1Q13424 505 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 INPP5JQ15735 1006 aaPredicted RBP17.68■□□□□ 0.42
TREX1-205ENST00000625293 MS4A18Q3C1V0 323 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 ACSM3Q53FZ2 586 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 FAM27D1Q5T7N8 215 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 CEACAM19Q7Z692 300 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 SLC22A16Q86VW1 577 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 WDSUB1Q8N9V3 476 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 MNTQ99583 582 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 ZPBPQ9BS86 351 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 SPRY4Q9C004 299 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 STRADBQ9C0K7 418 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 SRRQ9GZT4 340 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 B9D1Q9UPM9 204 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 TVP23AA6NH52 213 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 NPIPB13A6NJU9 1138 aa17.68■□□□□ 0.42
TREX1-205ENST00000625293 NPIPB4C9JG80 1138 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms