RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 FXNQ16595 210 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 CEACAM16Q2WEN9 425 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 NRN1LQ496H8 165 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 HIKESHIQ53FT3 197 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 SLC46A3Q7Z3Q1 461 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 YTHDF3Q7Z739 585 aaKnown RBP10.86□□□□□ -0.67
LINC00963-217ENST00000624009 PIGWQ7Z7B1 504 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 DPPA2Q7Z7J5 298 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 RNF113BQ8IZP6 322 aaKnown RBP10.86□□□□□ -0.67
LINC00963-217ENST00000624009 TMEM239Q8WW34 195 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 PERPQ96FX8 193 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 SLC25A44Q96H78 314 aaPredicted RBP10.86□□□□□ -0.67
LINC00963-217ENST00000624009 SEPHS2Q99611 448 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 KCTD14Q9BQ13 255 aaPredicted RBP10.86□□□□□ -0.67
LINC00963-217ENST00000624009 ANKRD19PQ9H560 264 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 CBLN4Q9NTU7 201 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 NDE1Q9NXR1 346 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 POU2F3Q9UKI9 436 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 FBXL3Q9UKT7 428 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 ARL2BPQ9Y2Y0 163 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 MED31Q9Y3C7 131 aa10.86□□□□□ -0.67
LINC00963-217ENST00000624009 A0A1W2PR80 420 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 E7EQL1 145 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 GSTA4O15217 222 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 DCTN3O75935 186 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 CD8AP01732 235 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 CRYAAP02489 173 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 NR2C1P13056 603 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 IFNGR1P15260 489 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 CBR1P16152 277 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 CBLP22681 906 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 APOBEC3AP31941 199 aaPredicted RBP10.85□□□□□ -0.67
LINC00963-217ENST00000624009 OR1E2P47887 323 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 PSME3P61289 254 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 ARF1P84077 181 aaKnown RBP10.85□□□□□ -0.67
LINC00963-217ENST00000624009 LGALS3BPQ08380 585 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 IFI44LQ53G44 452 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 C11orf71Q6IPW1 123 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 SLC35D2Q76EJ3 337 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 NKAIN4Q8IVV8 208 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 FBXL14Q8N1E6 418 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 MUC15Q8N387 334 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 FAM156AQ8NDB6 213 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 OR4F15Q8NGB8 312 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 TMEM255BQ8WV15 326 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 NEUROG1Q92886 237 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 TMEM54Q969K7 222 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 SGTBQ96EQ0 304 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 TPD52L3Q96J77 140 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 COX4I2Q96KJ9 171 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 LRRC37BQ96QE4 947 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 MED29Q9NX70 200 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 A4GNTQ9UNA3 340 aa10.85□□□□□ -0.67
LINC00963-217ENST00000624009 CR1P17927 2039 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 A0A1W2PRG6 482 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 LRRN3E7EW58 273 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 H7C417 338 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 M0R3G1 203 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 RNF13O43567 381 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 OR7A10O76100 309 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 BCL10O95999 233 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 IGHG1P01857 330 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 INHBBP09529 407 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 UMPSP11172 480 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 HSD17B1P14061 328 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 CDH2P19022 906 aaPredicted RBP10.84□□□□□ -0.67
LINC00963-217ENST00000624009 FUT1P19526 365 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 CSNK1A1P48729 337 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 DAP3P51398 398 aaKnown RBP10.84□□□□□ -0.67
LINC00963-217ENST00000624009 MNAT1P51948 309 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 ZNF133P52736 654 aaPredicted RBP10.84□□□□□ -0.67
LINC00963-217ENST00000624009 UGT2B15P54855 530 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 BIDP55957 195 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 GNGT1P63211 74 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 HIST3H3Q16695 136 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 PIWIL3Q7Z3Z3 882 aaKnown RBP10.84□□□□□ -0.67
LINC00963-217ENST00000624009 LSRQ86X29 649 aaPredicted RBP10.84□□□□□ -0.67
LINC00963-217ENST00000624009 NUP37Q8NFH4 326 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 FNDC8Q8TC99 324 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 NANOS1Q8WY41 292 aaKnown RBP10.84□□□□□ -0.67
LINC00963-217ENST00000624009 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 TXNDC15Q96J42 360 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 Q96MF0 132 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 FOXB1Q99853 325 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 KCNS3Q9BQ31 491 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 ULBP2Q9BZM5 246 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 FAM107BQ9H098 131 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 GORASP2Q9H8Y8 452 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 GLTPQ9NZD2 209 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 HIF3AQ9Y2N7 669 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 ATRQ13535 2644 aa10.84□□□□□ -0.67
LINC00963-217ENST00000624009 IGHV1-18A0A0C4DH31 117 aa10.83□□□□□ -0.68
LINC00963-217ENST00000624009 C11orf98E9PRG8 122 aa10.83□□□□□ -0.68
LINC00963-217ENST00000624009 KPNA4O00629 521 aaPredicted RBP10.83□□□□□ -0.68
LINC00963-217ENST00000624009 PGA4P0DJD7 388 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms