RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NDRG1Q92597 394 aaKnown RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF578Q96N58 590 aaPredicted RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 TGS1Q96RS0 853 aaKnown RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 RARRES2Q99969 163 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 RASL11BQ9BPW5 248 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 RACGAP1Q9H0H5 632 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 TMEM185BQ9H7F4 350 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 ANKRA2Q9H9E1 313 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 EML4Q9HC35 981 aaKnown RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
CPNE3-213ENST00000622183 MMP26Q9NRE1 261 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 FRMPD3Q5JV73 1810 aa3.39□□□□□ -1.87
CPNE3-213ENST00000622183 NINLQ9Y2I6 1382 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 A0A0G2JN53 185 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 TRBV11-1A0A0K0K1C0 115 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 A0A1B0GVY2 172 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 DLGAP1O14490 977 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 SLC31A2O15432 143 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 CLOCKO15516 846 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 CDH16O75309 829 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF24P17028 368 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 ELK1P19419 428 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 NSG1P42857 185 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 SYKP43405 635 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 CCNHP51946 323 aaPredicted RBP3.38□□□□□ -1.87
CPNE3-213ENST00000622183 IRX3P78415 501 aaPredicted RBP3.38□□□□□ -1.87
CPNE3-213ENST00000622183 PSG7Q13046 419 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 VAX1Q5SQQ9 334 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 CNIH2Q6PI25 160 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 CCDC73Q6ZRK6 1079 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 CENPQQ7L2Z9 268 aaPredicted RBP3.38□□□□□ -1.87
CPNE3-213ENST00000622183 C11orf53Q8IXP5 236 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 ZADH2Q8N4Q0 377 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 SUMF2Q8NBJ7 301 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 OR10G9Q8NGN4 311 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 OR1S2Q8NGQ3 325 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 OR1N2Q8NGR9 330 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 KIFAP3Q92845 792 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 ATP5SQ99766 215 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 EXO5Q9H790 373 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF160Q9HCG1 818 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 RABL2AQ9UBK7 228 aaPredicted RBP3.38□□□□□ -1.87
CPNE3-213ENST00000622183 PITPNC1Q9UKF7 332 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 ATRXP46100 2492 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 USP47Q96K76 1375 aa3.38□□□□□ -1.87
CPNE3-213ENST00000622183 GJE1A6NN92 205 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 RAB29O14966 203 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 CACNG3O60359 315 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 EIF3GO75821 320 aaKnown RBP eCLIP3.37□□□□□ -1.87
CPNE3-213ENST00000622183 OR2J3O76001 311 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 TSPAN13O95857 204 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 FGGP02679 453 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 ALDOBP05062 364 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 TDGF1P13385 188 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 HPGDP15428 266 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 CTRLP40313 264 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 ATP5OP48047 213 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 TDGF1P3P51864 188 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 WNT4P56705 351 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 RPS15P62841 145 aaKnown RBP3.37□□□□□ -1.87
CPNE3-213ENST00000622183 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 C6orf89Q6UWU4 347 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF836Q6ZNA1 936 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 ACP7Q6ZNF0 438 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 COX15Q7KZN9 410 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 BZW1Q7L1Q6 419 aaKnown RBP3.37□□□□□ -1.87
CPNE3-213ENST00000622183 BIVMQ86UB2 503 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 DCAF4L2Q8NA75 395 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 FAM81AQ8TBF8 368 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 MYDGFQ969H8 173 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 C20orf24Q9BUV8 137 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 CWH43Q9H720 699 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 PDFQ9HBH1 243 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 ADAM22Q9P0K1 906 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 GNPTGQ9UJJ9 305 aa3.37□□□□□ -1.87
CPNE3-213ENST00000622183 LSM7Q9UK45 103 aaKnown RBP3.37□□□□□ -1.87
CPNE3-213ENST00000622183 PACSIN2Q9UNF0 486 aaPredicted RBP3.37□□□□□ -1.87
CPNE3-213ENST00000622183 CYSRT1A8MQ03 144 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 TRAF3IP2O43734 574 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 TNFSF13O75888 250 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 OR2F2O95006 317 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 H6PDO95479 791 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 KLF8O95600 359 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 INSP01308 110 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 GIPP09681 153 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 GKN3PP0CG01 181 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 RRM2P31350 389 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 FOXN2P32314 431 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 NAA10P41227 235 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 SH3BGRP55822 239 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 C21orf59P57076 290 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 RGS8P57771 180 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 YWHAGP61981 247 aaKnown RBP eCLIP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF92Q03936 586 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 FZD2Q14332 565 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 ALKBH6Q3KRA9 238 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 C9orf135Q5VTT2 229 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 CERS6Q6ZMG9 384 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 PEX26Q7Z412 305 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 LINC01555Q8NAE3 123 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms