RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ADAM10O14672 748 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ARHGEF9O43307 516 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 AKR7A3O95154 331 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 RENP00797 406 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 HIST1H2ABP04908 130 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 RAB40ALP0C0E4 278 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ADRA2CP18825 462 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 CSRP1P21291 193 aaKnown RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 FBLP22087 321 aaKnown RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 STOMP27105 288 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 GDNFP39905 211 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PTH2RP49190 550 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PNLIPRP2P54317 469 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 OR1D5P58170 312 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 TOMM34Q15785 309 aaPredicted RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 SGCBQ16585 318 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 FAM69AQ5T7M9 428 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 HES5Q5TA89 166 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 YOD1Q5VVQ6 348 aaPredicted RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 CREB3L2Q70SY1 520 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 HIST3H2AQ7L7L0 130 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PRSS42Q7Z5A4 293 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PLXDC1Q8IUK5 500 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 PRR22Q8IZ63 422 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 OR56B4Q8NH76 319 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ZNF519Q8TB69 540 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 RAB40AQ8WXH6 277 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 HIST1H2ACQ93077 130 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ORAI1Q96D31 301 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ADAD1Q96M93 576 aaKnown RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 GAL3ST4Q96RP7 486 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 YIPF2Q9BWQ6 316 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 MED28Q9H204 178 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 AUNIPQ9H7T9 357 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 ZNF304Q9HCX3 659 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 EMC3Q9P0I2 261 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 AKAP7Q9P0M2 348 aaPredicted RBP8.54□□□□□ -1.04
PDPN-212ENST00000621990 OR5V1Q9UGF6 321 aa8.54□□□□□ -1.04
PDPN-212ENST00000621990 TMEM212A6NML5 194 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 NDUFB5O43674 189 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 FADS1O60427 444 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 IGHMP01871 453 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 PGCP20142 388 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 CXCR1P25024 350 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 ABCD3P28288 659 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 CSF2RBP32927 897 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MAGEB1P43366 347 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MRPS10P82664 201 aaKnown RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 ZP2Q05996 745 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 SNTB2Q13425 540 aaKnown RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 ELFN2Q5R3F8 820 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 FAM205BPQ63HN1 556 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 PRSS45Q7RTY3 260 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MARCH3Q86UD3 253 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 KMT5CQ86Y97 462 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 C9orf62Q8N4C0 152 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 OR2G2Q8NGZ5 317 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 NSMAFQ92636 917 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MIB2Q96AX9 1013 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 OMA1Q96E52 524 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 INTS14Q96SY0 518 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 OR51J1Q9H342 316 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 SRA1Q9HD15 236 aaKnown RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 PTTG3PQ9NZH4 202 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 LAMP5Q9UJQ1 280 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MRPS7Q9Y2R9 242 aaKnown RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 A0A1B0GX78 115 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 ANKRD34BA5PLL1 514 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 H7C1C5 153 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 DUX1O43812 170 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 SDC3O75056 442 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 DXOO77932 396 aaKnown RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 WISP1O95388 367 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 LDOC1O95751 146 aaPredicted RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 ECDO95905 644 aaPredicted RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 FOLR1P15328 257 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 PRKCAP17252 672 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 LCN6P62502 163 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 GPLD1P80108 840 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 GALK2Q01415 458 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 PLCXD2Q0VAA5 305 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 RASGEF1BQ0VAM2 473 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 CBFBQ13951 182 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 NSDHLQ15738 373 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 STPG1Q5TH74 334 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 SEZ6L2Q6UXD5 910 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 FCRLAQ7L513 359 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MAMDC2Q7Z304 686 aaPredicted RBP8.53□□□□□ -1.04
PDPN-212ENST00000621990 OTOSQ8NHW6 89 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 DEDD2Q8WXF8 326 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 HGDQ93099 445 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 MCHR2Q969V1 340 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 HAVCR1Q96D42 359 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 NRSN2Q9GZP1 204 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 VN1R1Q9GZP7 353 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 SLITRK2Q9H156 845 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 SYT4Q9H2B2 425 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 ZFP64Q9NPA5 681 aa8.53□□□□□ -1.04
PDPN-212ENST00000621990 VSX1Q9NZR4 365 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms