RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 E2F6O75461 281 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 COX5AP20674 150 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 IST1P53990 364 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 FOXG1P55316 489 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-245ENST00000621399 CTXN1P60606 82 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 ACTR3P61158 418 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 KPNB1Q14974 876 aaKnown RBP16.37■□□□□ 0.21
CIRBP-245ENST00000621399 ZNF787Q6DD87 383 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 WDFY1Q8IWB7 410 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 C20orf196Q8IYI0 205 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 ZNF433Q8N7K0 673 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-245ENST00000621399 LRRC75AQ8NAA5 344 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 OR6N1Q8NGY5 312 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 FAM222BQ8WU58 562 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 S100PBPQ96BU1 408 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 DUS3LQ96G46 650 aaKnown RBP16.37■□□□□ 0.21
CIRBP-245ENST00000621399 WFIKKN1Q96NZ8 548 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 ALKBH3Q96Q83 286 aaPredicted RBP16.37■□□□□ 0.21
CIRBP-245ENST00000621399 MED18Q9BUE0 208 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 OR10A4Q9H209 315 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 ARMC1Q9NVT9 282 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 SIGLEC7Q9Y286 467 aa16.37■□□□□ 0.21
CIRBP-245ENST00000621399 PDLIM1O00151 329 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 CASKO14936 926 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 DEAF1O75398 565 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 NDUFB2O95178 105 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 GASTP01350 101 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 ITGA5P08648 1049 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 PPP3CBP16298 524 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 CDH2P19022 906 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 MPGP29372 298 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 GSSP48637 474 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 CSNK1A1P48729 337 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 ROR2Q01974 943 aaKnown RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 TGFBR3Q03167 851 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 TSPAN31Q12999 210 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 TOP3AQ13472 1001 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 ZNF770Q6IQ21 691 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 HMBOX1Q6NT76 420 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 LINGO2Q7L985 606 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 HDDC2Q7Z4H3 204 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 AQP11Q8NBQ7 271 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 OR10G2Q8NGC3 310 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 GIPC3Q8TF64 312 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 ZNF566Q969W8 418 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 MARVELD3Q96A59 401 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 SLC25A44Q96H78 314 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 LRR1Q96L50 414 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 DACH2Q96NX9 599 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 USB1Q9BQ65 265 aaKnown RBP16.36■□□□□ 0.21
CIRBP-245ENST00000621399 TXNIPQ9H3M7 391 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 B3GAT2Q9NPZ5 323 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 KCNN3Q9UGI6 736 aa16.36■□□□□ 0.21
CIRBP-245ENST00000621399 NPIPB13A6NJU9 1138 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 NPIPB4C9JG80 1138 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 RAD51DO75771 328 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 IGHG1P01857 330 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 EPXP11678 715 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 ZNF26P17031 533 aaPredicted RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 RPL27P61353 136 aaKnown RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 ERVK-25P63136 954 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 PHYHD1Q5SRE7 291 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 ARMC4Q5T2S8 1044 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 SMARCD3Q6STE5 483 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 TMEM179BQ7Z7N9 219 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 FANK1Q8TC84 345 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 ASB10Q8WXI3 467 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 ZC3HAV1LQ96H79 300 aaKnown RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 KATNB1Q9BVA0 655 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 POLDIP3Q9BY77 421 aaKnown RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 CRLF2Q9HC73 371 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 GPR35Q9HC97 309 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 PDP1Q9P0J1 537 aaPredicted RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 STX18Q9P2W9 335 aaKnown RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 IL20RAQ9UHF4 553 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 ZNF346Q9UL40 294 aaKnown RBP16.35■□□□□ 0.21
CIRBP-245ENST00000621399 MGAT4BQ9UQ53 548 aa16.35■□□□□ 0.21
CIRBP-245ENST00000621399 CENPEQ02224 2701 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 RPL36A-HNRNPH2H7BZ11 118 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 CD14P08571 375 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 FCGR1AP12314 374 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 ACADSP16219 412 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 FASP25445 335 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 ARHGDIAP52565 204 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 CLRN1P58418 232 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 RUNX1T1Q06455 604 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 STK11Q15831 433 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 ATP6AP1Q15904 470 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 GABRA6Q16445 453 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 OR7E24Q6IFN5 339 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 ALKBH2Q6NS38 261 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 C22orf34Q6ZV56 151 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 C10orf67Q8IYJ2 551 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 PYDC1Q8WXC3 89 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 HSD17B8Q92506 261 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 TMEM54Q969K7 222 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 GTPBP3Q969Y2 492 aaKnown RBP16.34■□□□□ 0.21
CIRBP-245ENST00000621399 TSPAN32Q96QS1 320 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 ULBP2Q9BZM5 246 aa16.34■□□□□ 0.21
CIRBP-245ENST00000621399 DENND2DQ9H6A0 471 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms