RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZNF14P17017 642 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 FKBP2P26885 142 aaKnown RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 HTR2CP28335 458 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 MPLP40238 635 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 GIPRP48546 466 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 AGFG1P52594 562 aaKnown RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 MLLT11Q13015 90 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 LIPHQ8WWY8 451 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 RTL8AQ9BWD3 113 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 SMIM3Q9BZL3 60 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 LIN7BQ9HAP6 207 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 SCN7AQ01118 1682 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 A8MXE2 369 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 GAPDHSO14556 408 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 CTSLP07711 333 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 DUSP5Q16690 384 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 OR2G6Q5TZ20 316 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 Q6ZNB5 142 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 FCRLAQ7L513 359 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 ZBTB8AQ96BR9 441 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 PPIL3Q9H2H8 161 aaKnown RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 SYT5O00445 386 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 IFNA10P01566 189 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 ZGLP1P0C6A0 271 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 GABRG2P18507 467 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 RFC3P40938 356 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 METAP1DQ6UB28 335 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 FAM198BQ6UWH4 519 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 KMT5CQ86Y97 462 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 RDH10Q8IZV5 341 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 DCLRE1CQ96SD1 692 aaKnown RBP10.47□□□□□ -0.73
CLIP1-219ENST00000620786 ASF1BQ9NVP2 202 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 CHRNA9Q9UGM1 479 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 FBXO4Q9UKT5 387 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 A0A1B0GUL6 1792 aa10.47□□□□□ -0.73
CLIP1-219ENST00000620786 STMND1H3BQB6 276 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 SGCEO43556 437 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 DPM1O60762 260 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 KITLGP21583 273 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 ELAVL4P26378 380 aaKnown RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 SNCAP37840 140 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 BTG2P78543 158 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 PRTGQ2VWP7 1150 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 PAN3Q58A45 887 aaKnown RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 HEPHL1Q6MZM0 1159 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 B3GLCTQ6Y288 498 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 RBMXL3Q8N7X1 1067 aaKnown RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 ST7LQ8TDW4 575 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 SECTM1Q8WVN6 248 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 SLC35A4Q96G79 324 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF582Q96NG8 517 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 WNT16Q9UBV4 365 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 COA3Q9Y2R0 106 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF732B4DXR9 585 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 OR2J2O76002 312 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 RGS11O94810 467 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 DEFA4P12838 97 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 S100A12P80511 92 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 ZNF91Q05481 1191 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 DUSP7Q16829 419 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 Q6ZPB1 254 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 TMEM185AQ8NFB2 350 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 CSF3RQ99062 836 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 CHST11Q9NPF2 352 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 HRH3Q9Y5N1 445 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 TNFSF11O14788 317 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 IGLV3-27P01718 113 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 HOXB5P09067 269 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 ZDHHC11BP0C7U3 371 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 BLVRBP30043 206 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 C1orf210Q8IVY1 113 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 KDM8Q8N371 416 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 FGGYQ96C11 551 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 LRRC61Q9BV99 259 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 PRR14Q9BWN1 585 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 UNKLQ9H9P5 680 aaKnown RBP10.46□□□□□ -0.73
CLIP1-219ENST00000620786 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
CLIP1-219ENST00000620786 OR6C6A6NF89 314 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 GPRIN2O60269 458 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 ICOSLGO75144 302 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 PTPN6P29350 595 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 GK2Q14410 553 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-219ENST00000620786 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 FXNQ16595 210 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 ACTBL2Q562R1 376 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 PDZD9Q8IXQ8 264 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 PDFQ9HBH1 243 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 OR52A1Q9UKL2 312 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 DEGS1O15121 323 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 ARPC5O15511 151 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 HRO43593 1189 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 FGF17O60258 216 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 CPT2P23786 658 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 GPR3P46089 330 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 RPL27P61353 136 aaKnown RBP10.46□□□□□ -0.74
CLIP1-219ENST00000620786 FAPQ12884 760 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 ZMAT1Q5H9K5 638 aa10.46□□□□□ -0.74
CLIP1-219ENST00000620786 ANKRD9Q96BM1 317 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-219ENST00000620786 P2RX6O15547 441 aa10.45□□□□□ -0.74
CLIP1-219ENST00000620786 SPDEFO95238 335 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms