RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 HDAC2Q92769 488 aaKnown RBP7.18□□□□□ -1.26
TARDBP-219ENST00000617757 PLEKHA8Q96JA3 519 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 NMNAT3Q96T66 252 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 EMC6Q9BV81 110 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 PRRG4Q9BZD6 226 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 FN3KQ9H479 309 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 HINT3Q9NQE9 182 aaKnown RBP7.18□□□□□ -1.26
TARDBP-219ENST00000617757 CLCF1Q9UBD9 225 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF175Q9Y473 711 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 FLVCR1Q9Y5Y0 555 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 SHANK1Q9Y566 2161 aa7.18□□□□□ -1.26
TARDBP-219ENST00000617757 IGKV3D-15A0A087WSY6 115 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 SLC35F4A4IF30 521 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 OR6C68A6NDL8 312 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 A6NIZ1 184 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 SLC22A20A6NK97 555 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 FAM183AA6NL82 134 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 PRR23D1E9PI22 279 aaPredicted RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 H7C1C5 153 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 WDR1O75083 606 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ENTPD6O75354 484 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 TRMUO75648 421 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF432O94892 652 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 PRR23D2P0DMB1 279 aaPredicted RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 EDN3P14138 238 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 GABRA1P14867 456 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 FMO3P31513 532 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 NTF4P34130 210 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 BIDP55957 195 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CLDN17P56750 224 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 RAP1BP61224 184 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 LCN6P62502 163 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 RAP1AP62834 184 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 RUNX1T1Q06455 604 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CAMK2DQ13557 499 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 RNPS1Q15287 305 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 SF3B4Q15427 424 aaKnown RBP eCLIP7.17□□□□□ -1.268e-7■■□□□ 12.3
TARDBP-219ENST00000617757 SMN1Q16637 294 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 TMEM201Q5SNT2 666 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 AADACL4Q5VUY2 407 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 MEDAGQ5VYS4 303 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 FAM205BPQ63HN1 556 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 GTF2IRD2BQ6EKJ0 949 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF585AQ6P3V2 769 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 PLBD1Q6P4A8 553 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 GFRALQ6UXV0 394 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CXXC5Q7LFL8 322 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 P4HA3Q7Z4N8 544 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 BCDIN3DQ7Z5W3 292 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 GTF2IRD2Q86UP8 949 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 JAZF1Q86VZ6 243 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CYB561A3Q8NBI2 242 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 OR6X1Q8NH79 312 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 FAM57AQ8TBR7 257 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CPT1CQ8TCG5 803 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ABHD3Q8WU67 409 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 PTP4A1Q93096 173 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF775Q96BV0 537 aaPredicted RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 SLC25A44Q96H78 314 aaPredicted RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 LRR1Q96L50 414 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ADAD1Q96M93 576 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 Q96MT0 163 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF385AQ96PM9 386 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 SNX18Q96RF0 628 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 TRIB1Q96RU8 372 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 KCNK17Q96T54 332 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 HCAR1Q9BXC0 346 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 MRPL13Q9BYD1 178 aaKnown RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 NMNAT2Q9BZQ4 307 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 MED20Q9H944 212 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 RNF122Q9H9V4 155 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CALHM2Q9HA72 323 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 BCO1Q9HAY6 547 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 CLN6Q9NWW5 311 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 DNAJC27Q9NZQ0 273 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 VSX1Q9NZR4 365 aaPredicted RBP7.17□□□□□ -1.26
TARDBP-219ENST00000617757 KLHL9Q9P2J3 617 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF835Q9Y2P0 537 aa7.17□□□□□ -1.26
TARDBP-219ENST00000617757 ZGRF1Q86YA3 2104 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 PKD1L2Q7Z442 2459 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 SLC22A23A1A5C7 686 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 PRSS37A4D1T9 235 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 SH3D21A4FU49 640 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 CD8B2A6NJW9 211 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF726A6NNF4 738 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 ZNF724A8MTY0 619 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 CENPBD1B2RD01 187 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 SLC1A7O00341 560 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 XKRYO14609 159 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 GPR171O14626 319 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
TARDBP-219ENST00000617757 PRODHO43272 600 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 AKAP8O43823 692 aaKnown RBP7.16□□□□□ -1.26
TARDBP-219ENST00000617757 RENP00797 406 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 YES1P07947 543 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 PGA4P0DJD7 388 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 PGA3P0DJD8 388 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 FCGR2AP12318 317 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 ABOP16442 354 aa7.16□□□□□ -1.26
TARDBP-219ENST00000617757 SPI1P17947 270 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms