RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ATF4P18848 351 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 TACR3P29371 465 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 LTBQ06643 244 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 BTBD16Q32M84 506 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 WBP2NLQ6ICG8 309 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 AKAP1Q92667 903 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 UBL7Q96S82 380 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 GRHPRQ9UBQ7 328 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 CYB5R1Q9UHQ9 305 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 TINAGQ9UJW2 476 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 KLHDC2Q9Y2U9 406 aa12.64□□□□□ -0.39
CACNA1C-231ENST00000616390 SHOXO15266 292 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 RAD1O60671 282 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ZFPL1O95159 310 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 CSNK1EP49674 416 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 NR0B1P51843 470 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 SLC37A1P57057 533 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 EGR4Q05215 589 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF74Q16587 644 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 MARCH3Q86UD3 253 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF527Q8NB42 609 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ZSCAN1Q8NBB4 408 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 DNAAF1Q8NEP3 725 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 OR6N2Q8NGY6 317 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ULBP3Q9BZM4 244 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 CUTCQ9NTM9 273 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 PIN1P1O15428 100 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF749O43361 778 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 MST1P26927 711 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 BTCP35070 178 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 PRPS1P60891 318 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 FCN2Q15485 313 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 SLC36A2Q495M3 483 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 SFRP4Q6FHJ7 346 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 OR5M10Q6IEU7 315 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 TIGD4Q8IY51 512 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 LPAR4Q99677 370 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 MED28Q9H204 178 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 NCOR1P1Q9H4R4 102 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 GTF2A1LQ9UNN4 478 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 ZNF175Q9Y473 711 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 HSPB11Q9Y547 144 aa12.63□□□□□ -0.39
CACNA1C-231ENST00000616390 FREM3P0C091 2139 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 RAB19A4D1S5 217 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 GLCEO94923 617 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 HLA-DQA2P01906 255 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 ANKRD34CP0C6C1 535 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 FASLGP48023 281 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 RPL6Q02878 288 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 RPL18Q07020 188 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 YIPF5Q969M3 257 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 CREB3L1Q96BA8 519 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 NKX3-1Q99801 234 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 WDR76Q9H967 626 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 MMP25Q9NPA2 562 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 NPFFR2Q9Y5X5 522 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 COL4A2P08572 1712 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 HIST1H2ABP04908 130 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 FCER2P06734 321 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 GABRA4P48169 554 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 SKP2Q13309 424 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 NSDHLQ15738 373 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 PLA1AQ53H76 456 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 HIST3H2AQ7L7L0 130 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 DPY19L4Q7Z388 723 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 ATG4DQ86TL0 474 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 CMIPQ8IY22 773 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 SYS1Q8N2H4 156 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 HIST1H2ACQ93077 130 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 TAAR8Q969N4 342 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 CACNG6Q9BXT2 260 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 SYT4Q9H2B2 425 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 CBY1Q9Y3M2 126 aa12.62□□□□□ -0.39
CACNA1C-231ENST00000616390 MED12Q93074 2177 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 TEX51A0A1B0GUA7 166 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 MAS1P04201 325 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 TCRBP04435 133 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 UCHL1P09936 223 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 IL12BP29460 328 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 LINC01590Q5TEZ4 76 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 STPG1Q5TH74 334 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 LIPNQ5VXI9 398 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 SYT13Q7L8C5 426 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 DDOQ99489 341 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 GDF15Q99988 308 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 DPAGT1Q9H3H5 408 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 GPR27Q9NS67 375 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 MTCH2Q9Y6C9 303 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.61□□□□□ -0.39
CACNA1C-231ENST00000616390 TRAV1-2A0A0B4J238 106 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms