RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 HDAC2Q92769 488 aaKnown RBP4.96□□□□□ -1.61
CPNE3-208ENST00000614678 RASD2Q96D21 266 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ZHX1-C8orf76Q96EF9 292 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 RADILQ96JH8 1075 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 OXGR1Q96P68 337 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 HOPXQ9BPY8 73 aaPredicted RBP4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ARMC7Q9H6L4 198 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 ZNF226Q9NYT6 803 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 MALRD1Q5VYJ5 2156 aa4.96□□□□□ -1.61
CPNE3-208ENST00000614678 FAM171A2A8MVW0 826 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 NDUFAB1O14561 156 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SMAD7O15105 426 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 KRT33AO76009 404 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SEMG1P04279 462 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 C8BP07358 591 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CD40P25942 277 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 GTF2E2P29084 291 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CAPZA2P47755 286 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CLK1P49759 484 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 IDH3GP51553 393 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 INTS11Q5TA45 600 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 UGT2A3Q6UWM9 527 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 IGFBPL1Q8WX77 278 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 BCL2L2Q92843 193 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 BPIFA2Q96DR5 249 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 TSPAN32Q96QS1 320 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 BTBD10Q9BSF8 475 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 TMEM204Q9BSN7 226 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 NAA11Q9BSU3 229 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 THTPAQ9BU02 230 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SLC9A8Q9Y2E8 581 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ATRQ13535 2644 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 GPRIN2O60269 458 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 NPPAP01160 153 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CECR9P0C854 216 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 DANCRP0C864 163 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 HOXC12P31275 282 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 RPS27P42677 84 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CBX1P83916 185 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 DEFB113Q30KQ7 82 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ALKBH6Q3KRA9 238 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 FGD3Q5JSP0 725 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 GKAP1Q5VSY0 366 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SLC22A25Q6T423 547 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 MDP1Q86V88 176 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 LRP11Q86VZ4 500 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 UEVLDQ8IX04 471 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SKA3Q8IX90 412 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 PGAM4Q8N0Y7 254 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SH3GL1Q99961 368 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 TMEM43Q9BTV4 400 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 FN3KQ9H479 309 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SLC17A5Q9NRA2 495 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CISD1Q9NZ45 108 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 EMC3Q9P0I2 261 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 MYEF2Q9P2K5 600 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 TCRBV5S2A0A599 114 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SLC22A2O15244 555 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SAGP10523 405 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 PSKH1P11801 424 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 GIPRP48546 466 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 IFI44LQ53G44 452 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ANKRD16Q6P6B7 361 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 HACD2Q6Y1H2 254 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ZER1Q7Z7L7 766 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ANKS4BQ8N8V4 417 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 LRRC75AQ8NAA5 344 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CCDC197Q8NCU1 140 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 OIT3Q8WWZ8 545 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 SLC7A6Q92536 515 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 PRRC1Q96M27 445 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 Q96M85 177 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 ZNF75AQ96N20 296 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 CCL19Q99731 98 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 NSRP1Q9H0G5 558 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 MRPL39Q9NYK5 338 aaKnown RBP4.96□□□□□ -1.62
CPNE3-208ENST00000614678 BAG5Q9UL15 447 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 B3GALT5Q9Y2C3 310 aa4.96□□□□□ -1.62
CPNE3-208ENST00000614678 GPR171O14626 319 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 OR7A10O76100 309 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 IFNW1P05000 195 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 QDPRP09417 244 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PGA4P0DJD7 388 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PGA3P0DJD8 388 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 MPGP29372 298 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ACVR1BP36896 505 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 HOXA4Q00056 320 aaPredicted RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 HGFACQ04756 655 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PDK3Q15120 406 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 MEP1BQ16820 701 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 TIMM23BQ5SRD1 257 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 KRT80Q6KB66 452 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 ERICH5Q6P6B1 374 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 PTCHD4Q6ZW05 846 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 C20orf196Q8IYI0 205 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 GTF3AQ92664 365 aaKnown RBP4.95□□□□□ -1.62
CPNE3-208ENST00000614678 TMEM45BQ96B21 275 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 NSL1Q96IY1 281 aa4.95□□□□□ -1.62
CPNE3-208ENST00000614678 FUZQ9BT04 418 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms