RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 KNOP1Q1ED39 458 aaKnown RBP1.31□□□□□ -2.2
BRCA2-207ENST00000614259 OR2B11Q5JQS5 317 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 OR2A2Q6IF42 318 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 ZNF730Q6ZMV8 503 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 ZNF600Q6ZNG1 722 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 CAMK2N1Q7Z7J9 78 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 KIAA1328Q86T90 577 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 ODF3L1Q8IXM7 274 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 RIMKLAQ8IXN7 391 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 NANOGP1Q8N7R0 232 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 ASCC1Q8N9N2 400 aaKnown RBP1.31□□□□□ -2.2
BRCA2-207ENST00000614259 ZNF248Q8NDW4 579 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 PLPPR1Q8TBJ4 325 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 CCDC126Q96EE4 140 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 LINC00479Q96M42 142 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 SORT1Q99523 831 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 GLT8D2Q9H1C3 349 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 TBC1D17Q9HA65 648 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 LCMT1Q9UIC8 334 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 KLHDC2Q9Y2U9 406 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 MEMO1Q9Y316 297 aa1.31□□□□□ -2.2
BRCA2-207ENST00000614259 IGHV1OR21-1A0A087WYE8 117 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 INAFM1C9JVW0 142 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 H0YIG0 161 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ANXA9O76027 345 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 HBE1P02100 147 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 OR5AL1P0C617 328 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PRDX6P30041 224 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 RGRP47804 291 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 VEGFCP49767 419 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 RAB35Q15286 201 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ATP6AP1Q15904 470 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 C1orf185Q5T7R7 199 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PID1Q7Z2X4 250 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 APLFQ8IW19 511 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 STPG4Q8N801 248 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ARAP3Q8WWN8 1544 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MRPL24Q96A35 216 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MRPL53Q96EL3 112 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 SLC45A3Q96JT2 553 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 CIB1Q99828 191 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 OPRPNQ99935 248 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ROPN1BQ9BZX4 212 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 GPN2Q9H9Y4 310 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PALMDQ9NP74 551 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ABCB9Q9NP78 766 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ADARB2Q9NS39 739 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ARMCX1Q9P291 453 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 TNNQ9UQP3 1299 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PCF11O94913 1555 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MAGI3Q5TCQ9 1506 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 GRIN2BQ13224 1484 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 GAPVD1Q14C86 1478 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 CDHR2Q9BYE9 1310 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 hDV102S1A0JD36 115 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 SRRM3A6NNA2 597 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 C12orf71A8MTZ7 269 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 E5RGE8 158 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 EFNA2O43921 213 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 RPN2P04844 631 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ZNF853P0CG23 659 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 THRAP10827 490 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 CD1DP15813 335 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ZNF12P17014 697 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 UQCRC2P22695 453 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MSNP26038 577 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 GTF2H1P32780 548 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 DUTP33316 252 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MFAP2P55001 183 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PAX9P55771 341 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PITPNAQ00169 270 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 C17orf58Q2M2W7 97 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 KIR3DL3Q8N743 410 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 OR10G4Q8NGN3 311 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 CASTOR1Q8WTX7 329 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 C17orf50Q8WW18 174 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 GTF2H4Q92759 462 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 RPL3LQ92901 407 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 OR5B12Q96R08 314 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 OCR1Q9BZK8 76 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ACTR3CQ9C0K3 210 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 NLE1Q9NVX2 485 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 NSG2Q9Y328 171 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 KDM5CP41229 1560 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PLSCR5A0PG75 271 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 C19orf84I3L1E1 186 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 EIF3GO75821 320 aaKnown RBP eCLIP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 RAB36O95755 333 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MT3P25713 68 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ARHGDIAP52565 204 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 CTSWP56202 376 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ZNF121P58317 390 aaPredicted RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 RPL27P61353 136 aaKnown RBP1.3□□□□□ -2.2
BRCA2-207ENST00000614259 SEMG2Q02383 582 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 PEX6Q13608 980 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 ANGPT1Q15389 498 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 AWAT1Q58HT5 328 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 MFSD14CQ5VZR4 134 aa1.3□□□□□ -2.2
BRCA2-207ENST00000614259 SLC8B1Q6J4K2 584 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms