RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 GRK5P34947 590 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 ACVR1BP36896 505 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
CD48-203ENST00000613788 MELKQ14680 651 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 GUSBP1Q15486 140 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 ARMC4Q5T2S8 1044 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 NIPAL3Q6P499 406 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 MARVELD2Q8N4S9 558 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 CNEP1R1Q8N9A8 125 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 OR6K3Q8NGY3 331 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 ASB10Q8WXI3 467 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 SLC25A44Q96H78 314 aaPredicted RBP13.05□□□□□ -0.32
CD48-203ENST00000613788 Q96M85 177 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 EMC6Q9BV81 110 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 SFXN3Q9BWM7 321 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 GRIP2Q9C0E4 1043 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 FAM118AQ9NWS6 357 aa13.05□□□□□ -0.32
CD48-203ENST00000613788 TEX13CA0A0J9YWL9 993 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 OR6C65A6NJZ3 312 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 DLGAP1O14490 977 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 ACADSP16219 412 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 EPHA2P29317 976 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 OPRM1P35372 400 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 KIR2DL2P43627 348 aaPredicted RBP13.04□□□□□ -0.32
CD48-203ENST00000613788 UQCRFS1P47985 274 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 SIRPAP78324 504 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 FOXF2Q12947 444 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 SLX4IPQ5VYV7 408 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 TMEM236Q5W0B7 351 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 CASP12Q6UXS9 341 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 FJX1Q86VR8 437 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 DHRSXQ8N5I4 330 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 IQCF1Q8N6M8 205 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 OR4Q3Q8NH05 313 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 ZNF566Q969W8 418 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 MBOAT4Q96T53 435 aa13.04□□□□□ -0.32
CD48-203ENST00000613788 ZNF629Q9UEG4 869 aaPredicted RBP13.04□□□□□ -0.32
CD48-203ENST00000613788 SMG1Q96Q15 3661 aaKnown RBP13.04□□□□□ -0.32
CD48-203ENST00000613788 KIAA1549Q9HCM3 1950 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 A0A0G2JNJ9 132 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 LOC100130705A0A1B0GUX0 176 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 CENPBD1B2RD01 187 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 SLC16A6O15403 523 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 LRRTM2O43300 516 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 ARHGEF9O43307 516 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 AHCYL1O43865 530 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 SLC43A1O75387 559 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 IL18BPO95998 194 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 IFNGP01579 166 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 IGHG1P01857 330 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 NTF4P34130 210 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 HSPA13P48723 471 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 CAMK2DQ13557 499 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 KRR1Q13601 381 aaKnown RBP13.03□□□□□ -0.32
CD48-203ENST00000613788 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 TTC23Q5W5X9 447 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 NUFIP2Q7Z417 695 aaKnown RBP13.03□□□□□ -0.32
CD48-203ENST00000613788 ADCK1Q86TW2 530 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 JAZF1Q86VZ6 243 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 ZNF519Q8TB69 540 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 FNDC8Q8TC99 324 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 APH1AQ96BI3 265 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 PLEKHA8Q96JA3 519 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 HRASLS5Q96KN8 279 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 LRR1Q96L50 414 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 OR2M2Q96R28 347 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 Q9UFV3 132 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 KLHL21Q9UJP4 597 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 RIIAD1A6NNX1 92 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 TRMUO75648 421 aaKnown RBP13.03□□□□□ -0.32
CD48-203ENST00000613788 TNFSF13O75888 250 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 ZNF432O94892 652 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 NR2C1P13056 603 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 HIST1H1CP16403 213 aaKnown RBP13.03□□□□□ -0.32
CD48-203ENST00000613788 SELENOPP49908 381 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 AQP4P55087 323 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 CLRN1P58418 232 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 CDC42P60953 191 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 SNAPC1Q16533 368 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 IZUMO2Q6UXV1 221 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 TMEM123Q8N131 208 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 OR52E2Q8NGJ4 325 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 OR6N1Q8NGY5 312 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 CYGBQ8WWM9 190 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 RASD2Q96D21 266 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 RBP7Q96R05 134 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 ALG12Q9BV10 488 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 CMC2Q9NRP2 79 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 TVP23BQ9NYZ1 205 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 COQ3Q9NZJ6 369 aa13.03□□□□□ -0.32
CD48-203ENST00000613788 PROCRQ9UNN8 238 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms