RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PGDP52209 483 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 C1orf189Q5VU69 101 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 FAM199XQ6PEV8 388 aaPredicted RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 BTN2A1Q7KYR7 527 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 KCTD20Q7Z5Y7 419 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ATG4DQ86TL0 474 aaPredicted RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 EXD3Q8N9H8 876 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 LRRC75AQ8NAA5 344 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZNF671Q8TAW3 534 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 IFI44Q8TCB0 444 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 GFI1Q99684 422 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ALG12Q9BV10 488 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 MRI1Q9BV20 369 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ACTR6Q9GZN1 396 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 SLCO1C1Q9NYB5 712 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ING4Q9UNL4 249 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 MOKQ9UQ07 419 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 TRABD2BA6NFA1 517 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ELOA3DA6NLF2 546 aaPredicted RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 IFITM5A6NNB3 132 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 TOX3O15405 576 aaPredicted RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 CD14P08571 375 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ANXA3P12429 323 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 FBLP22087 321 aaKnown RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 GRK6P43250 576 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 BIKQ13323 160 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 SERTAD2Q14140 314 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZNF74Q16587 644 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 GSG1Q2KHT4 349 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZNF528Q3MIS6 628 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ELOA3BQ3SY89 546 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 GXYLT1Q4G148 440 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ESPNLQ6ZVH7 1005 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 CMTM4Q8IZR5 234 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 BMPERQ8N8U9 685 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZBTB44Q8NCP5 570 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ELOA3Q8NG57 546 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 MOSPD2Q8NHP6 518 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 SNAPC3Q92966 411 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 HGDQ93099 445 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 PHF21AQ96BD5 680 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 MVB12AQ96EY5 273 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 DERL3Q96Q80 235 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZFP64Q9NPA5 681 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 EMC3Q9P0I2 261 aa13.35□□□□□ -0.27
CDH1-213ENST00000612417 MRPS7Q9Y2R9 242 aaKnown RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 TMA7Q9Y2S6 64 aaKnown RBP13.35□□□□□ -0.27
CDH1-213ENST00000612417 ZFPL1O95159 310 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 TXNDC12O95881 172 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 CDKN2AP42771 156 aaKnown RBP13.34□□□□□ -0.27
CDH1-213ENST00000612417 NANOS3P60323 173 aaKnown RBP13.34□□□□□ -0.27
CDH1-213ENST00000612417 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
CDH1-213ENST00000612417 SKP2Q13309 424 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 LEG1Q6P5S2 330 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 SLC16A9Q7RTY1 509 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 NUP54Q7Z3B4 507 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 FGD2Q7Z6J4 655 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 ZNF527Q8NB42 609 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 RGP1Q92546 391 aaPredicted RBP13.34□□□□□ -0.27
CDH1-213ENST00000612417 GPR137Q96N19 417 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 ARRDC1-AS1Q9H2J1 176 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
CDH1-213ENST00000612417 AKAP7Q9P0M2 348 aaPredicted RBP13.34□□□□□ -0.27
CDH1-213ENST00000612417 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 PRR32B1ATL7 298 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 ITGA10O75578 1167 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 H2AFB2P0C5Z0 115 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 DPP4P27487 766 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 AVPR2P30518 371 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 SDHAP31040 664 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 UQCRC1P31930 480 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 GDNFP39905 211 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 C19orf57Q0VDD7 668 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 SNTB2Q13425 540 aaKnown RBP13.33□□□□□ -0.27
CDH1-213ENST00000612417 SQSTM1Q13501 440 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 FAM69AQ5T7M9 428 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 ARHGAP40Q5TG30 622 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 SLC25A38Q96DW6 304 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 Q96M85 177 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 C12orf10Q9HB07 376 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 MMP25Q9NPA2 562 aa13.33□□□□□ -0.27
CDH1-213ENST00000612417 COL5A1P20908 1838 aaPredicted RBP13.33□□□□□ -0.27
CDH1-213ENST00000612417 ADAMTS20P59510 1910 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 RALGAPA1Q6GYQ0 2036 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 A0A1B0GVI7 797 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 A0A1B0GX78 115 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 SULT1B1O43704 296 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 TACSTD2P09758 323 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 ANKRD34CP0C6C1 535 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 ASAH2BP0C7U1 165 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 AQP2P41181 271 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 DUSP3P51452 185 aaPredicted RBP13.33□□□□□ -0.28
CDH1-213ENST00000612417 CCR6P51684 374 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 ACY1Q03154 408 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 CD226Q15762 336 aa13.33□□□□□ -0.28
CDH1-213ENST00000612417 EMC4Q5J8M3 183 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms