RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ASB17Q8WXJ9 295 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 CLCC1Q96S66 551 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 THAP7Q9BT49 309 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 TSPAN10Q9H1Z9 355 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 OR10A2Q9H208 303 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 NOX4Q9NPH5 578 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 MEPEQ9NQ76 525 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PARPBPQ9NWS1 579 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 EMC3Q9P0I2 261 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 OSGIN1Q9UJX0 560 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 PCOLCE2Q9UKZ9 415 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 ZNF346Q9UL40 294 aaKnown RBP6.65□□□□□ -1.34
CSDE1-218ENST00000610726 CCDC88CQ9P219 2028 aa6.65□□□□□ -1.34
CSDE1-218ENST00000610726 TMEM265A0A087WTH1 108 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 FRG2CA6NGY1 282 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 SHISA8B8ZZ34 492 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 EIF1BO60739 113 aaKnown RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 JUNBP17275 347 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 ABCD3P28288 659 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 APLNRP35414 380 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 APOBEC1P41238 236 aaKnown RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 LSSP48449 732 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 MPEG1Q2M385 716 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 ZXDCQ2QGD7 858 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 DESI1Q6ICB0 168 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 DCXRQ7Z4W1 244 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 OR8H3Q8N146 312 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 NANOGP1Q8N7R0 232 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 INO80EQ8NBZ0 244 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 OR51T1Q8NGJ9 327 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 SNIP1Q8TAD8 396 aaKnown RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF431Q8TF32 576 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 NANOS1Q8WY41 292 aaKnown RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 TCEAL3Q969E4 200 aa6.65□□□□□ -1.35
CSDE1-218ENST00000610726 MOV10Q9HCE1 1003 aaKnown RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 ING1Q9UK53 422 aaPredicted RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.35
CSDE1-218ENST00000610726 TRBV5-3A0A0A0MS03 114 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ANKRD61A6NGH8 418 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 SPI1P17947 270 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 APEX1P27695 318 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 THBS2P35442 1172 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 LTBRP36941 435 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 RPS19P39019 145 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 UBE2IP63279 158 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 CORO6Q6QEF8 472 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 BAIAP2L2Q6UXY1 529 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 OR52N1Q8NH53 320 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 PIGCQ92535 297 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 AKAP1Q92667 903 aaKnown RBP eCLIP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ACOXLQ9NUZ1 547 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 FBXO9Q9UK97 447 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 MEMO1Q9Y316 297 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 RHBDD3Q9Y3P4 386 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 SCN2AQ99250 2005 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 NOTOA8MTQ0 251 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 KLRC4-KLRK1H3BQV0 150 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 HRKO00198 91 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 P2RY10O00398 339 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 CBX7O95931 251 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 PAHP00439 452 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 DBHP09172 617 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 RBMXP38159 391 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 NKX2-5P52952 324 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 FOXL2P58012 376 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 SIGLEC14Q08ET2 396 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 MRM1Q6IN84 353 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 TMEM205Q6UW68 189 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 UNQ6126/PRO20091Q6UXV3 157 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF813Q6ZN06 617 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 COX15Q7KZN9 410 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 BPHLQ86WA6 291 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ZBTB8BQ8NAP8 495 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 GALNT11Q8NCW6 608 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 THAP6Q8TBB0 222 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 BRIX1Q8TDN6 353 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 C20orf141Q9NUB4 165 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 CCDC59Q9P031 241 aaKnown RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 IGKV1-8A0A0C4DH67 115 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 OR6C76A6NM76 312 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 OR2AT4A6NND4 320 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 L7N2F9 121 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 PTTG1O95997 202 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 AKR1C4P17516 323 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ACTBP60709 375 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ACTG1P63261 375 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 HSF1Q00613 529 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ECH1Q13011 328 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ZMAT1Q5H9K5 638 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 CBLN3Q6UW01 205 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 DCDC5Q6ZRR9 648 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ARIH2OSQ8N7S6 290 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 IL17RDQ8NFM7 739 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 CPT1CQ8TCG5 803 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 SLC25A43Q8WUT9 341 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-218ENST00000610726 ADAMTS14Q8WXS8 1223 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 MENTQ9BUN1 341 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 PLCXD1Q9NUJ7 323 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 DNAJB6O75190 326 aa6.64□□□□□ -1.35
CSDE1-218ENST00000610726 SERPINA5P05154 406 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms