RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CSNK1A1P48729 337 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 DAP3P51398 398 aaKnown RBP16.81■□□□□ 0.28
SRSF4-206ENST00000605204 LGALS3BPQ08380 585 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 CEACAM16Q2WEN9 425 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 ZNF627Q7L945 461 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 LINGO2Q7L985 606 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 FITM2Q8N6M3 262 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 KBTBD8Q8NFY9 601 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 PFN4Q8NHR9 129 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 IGFBPL1Q8WX77 278 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 ACOT11Q8WXI4 607 aaPredicted RBP16.81■□□□□ 0.28
SRSF4-206ENST00000605204 ZNF566Q969W8 418 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 GSX2Q9BZM3 304 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 ULBP2Q9BZM5 246 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 GRIP2Q9C0E4 1043 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 SNX13Q9Y5W8 968 aa16.81■□□□□ 0.28
SRSF4-206ENST00000605204 C11orf98E9PRG8 122 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 M0R1B8 84 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 SERPINI2O75830 405 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 TSPAN19P0C672 248 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 NR2C1P13056 603 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 NCK1P16333 377 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 CDH11P55287 796 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 BIDP55957 195 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 RPS4XP62701 263 aaKnown RBP16.8■□□□□ 0.28
SRSF4-206ENST00000605204 HIKESHIQ53FT3 197 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 SLC22A25Q6T423 547 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 PRSS57Q6UWY2 283 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 CDK20Q8IZL9 346 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 LRRC17Q8N6Y2 441 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 BPIFA2Q96DR5 249 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 SLC25A44Q96H78 314 aaPredicted RBP16.8■□□□□ 0.28
SRSF4-206ENST00000605204 CDRT15Q96T59 188 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 EMC6Q9BV81 110 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 NDEL1Q9GZM8 345 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
SRSF4-206ENST00000605204 DLL4Q9NR61 685 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 CD300AQ9UGN4 299 aa16.8■□□□□ 0.28
SRSF4-206ENST00000605204 A0A1W2PRQ8 180 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 SHISA9B4DS77 424 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 BLOC1S5-TXNDC5H3BN57 136 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 M0R3G1 203 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 PRSS23O95084 383 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 BCL10O95999 233 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 IGHG1P01857 330 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 RHCEP18577 417 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 CALB2P22676 271 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 ARF1P84077 181 aaKnown RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 RPL18Q07020 188 aaKnown RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 DGCR6Q14129 220 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 TAF11Q15544 211 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 CARD17Q5XLA6 110 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 ZNF730Q6ZMV8 503 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 DEFB107AQ8IZN7 70 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 LILRB1Q8NHL6 650 aaPredicted RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 SMAP2Q8WU79 429 aaPredicted RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 NANOS1Q8WY41 292 aaKnown RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 POP5Q969H6 163 aaKnown RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 TXNDC15Q96J42 360 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 NSMCE2Q96MF7 247 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 KCNS3Q9BQ31 491 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 KATNB1Q9BVA0 655 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 INIPQ9NRY2 104 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 MAN2C1Q9NTJ4 1040 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 C20orf141Q9NUB4 165 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 ZNF701Q9NV72 531 aaPredicted RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 CISD1Q9NZ45 108 aaKnown RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 CRNNQ9UBG3 495 aaPredicted RBP16.79■□□□□ 0.28
SRSF4-206ENST00000605204 POU2F3Q9UKI9 436 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 ADAM21Q9UKJ8 722 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 TMEM5Q9Y2B1 443 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 HIF3AQ9Y2N7 669 aa16.79■□□□□ 0.28
SRSF4-206ENST00000605204 A0A1W2PR80 420 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 MCIDASD6RGH6 385 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 FFAR1O14842 300 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 IFI30P13284 250 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 SLC9A3P48764 834 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 NKX6-1P78426 367 aaPredicted RBP16.78■□□□□ 0.28
SRSF4-206ENST00000605204 CAMK2DQ13557 499 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 RRM2BQ7LG56 351 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 RNF148Q8N7C7 305 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 NSL1Q96IY1 281 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 SLC38A2Q96QD8 506 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 NELFAQ9H3P2 528 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 MUC13Q9H3R2 512 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 DENND2DQ9H6A0 471 aaPredicted RBP16.78■□□□□ 0.28
SRSF4-206ENST00000605204 NMNAT1Q9HAN9 279 aaPredicted RBP16.78■□□□□ 0.28
SRSF4-206ENST00000605204 KRCC1Q9NPI7 259 aaPredicted RBP16.78■□□□□ 0.28
SRSF4-206ENST00000605204 GLTPQ9NZD2 209 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 POFUT2Q9Y2G5 429 aa16.78■□□□□ 0.28
SRSF4-206ENST00000605204 NSD1Q96L73 2696 aaPredicted RBP16.78■□□□□ 0.28
SRSF4-206ENST00000605204 MGRN1O60291 552 aa16.77■□□□□ 0.28
SRSF4-206ENST00000605204 H1F0P07305 194 aaKnown RBP16.77■□□□□ 0.28
SRSF4-206ENST00000605204 DANCRP0C864 163 aa16.77■□□□□ 0.28
SRSF4-206ENST00000605204 SAGP10523 405 aaPredicted RBP16.77■□□□□ 0.28
SRSF4-206ENST00000605204 TCN1P20061 433 aaPredicted RBP16.77■□□□□ 0.28
SRSF4-206ENST00000605204 ARR3P36575 388 aa16.77■□□□□ 0.28
SRSF4-206ENST00000605204 YAP1P46937 504 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms