RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SLC38A4Q969I6 547 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 TMEM19Q96HH6 336 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 FOXB1Q99853 325 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 C12orf10Q9HB07 376 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 B3GAT2Q9NPZ5 323 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 DDX28Q9NUL7 540 aaKnown RBP14.31□□□□□ -0.12
USE1-208ENST00000600970 TAAR3PQ9P1P4 343 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 IFT52Q9Y366 437 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 PPIAL4AQ9Y536 164 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 CORINQ9Y5Q5 1042 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 TRRAPQ9Y4A5 3859 aa14.31□□□□□ -0.12
USE1-208ENST00000600970 A0A0G2JPF8 293 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 WDR91A4D1P6 747 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 HNRNPCL2B2RXH8 293 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 HNRNPCL3B7ZW38 293 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 RFXANKO14593 260 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 TYROBPO43914 113 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 HNRNPCL1O60812 293 aaKnown RBP14.3□□□□□ -0.12
USE1-208ENST00000600970 PRSS23O95084 383 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 UBL3O95164 117 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 CLPTM1O96005 669 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 FSHBP01225 129 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 IGHV2-5P01817 119 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 SERPINE1P05121 402 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 HNRNPCL4P0DMR1 293 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 RGS7BPQ6MZT1 257 aaPredicted RBP14.3□□□□□ -0.12
USE1-208ENST00000600970 OGFOD2Q6N063 350 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 C5orf46Q6UWT4 87 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 NHLRC1Q6VVB1 395 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 NET1Q7Z628 596 aaPredicted RBP14.3□□□□□ -0.12
USE1-208ENST00000600970 ZNF584Q8IVC4 421 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 ADPRHL1Q8NDY3 354 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 C22orf15Q8WYQ4 148 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 TXNDC15Q96J42 360 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 TSPAN32Q96QS1 320 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 SORT1Q99523 831 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 MEAF6Q9HAF1 191 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 NTN4Q9HB63 628 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 HINT3Q9NQE9 182 aaKnown RBP14.3□□□□□ -0.12
USE1-208ENST00000600970 AIG1Q9NVV5 245 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 MED29Q9NX70 200 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 RPS6KB2Q9UBS0 482 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 FBXL3Q9UKT7 428 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.3□□□□□ -0.12
USE1-208ENST00000600970 PKD1L1Q8TDX9 2849 aa14.3□□□□□ -0.12
USE1-208ENST00000600970 IGKV1D-42A0A075B6H8 117 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 TRAV36DV7A0A075B6V5 113 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 PATE4P0C8F1 98 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 ARAFP10398 606 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 NQO1P15559 274 aaKnown RBP14.29□□□□□ -0.12
USE1-208ENST00000600970 FPR2P25090 351 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 CRYBB2P43320 205 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 ZP4Q12836 540 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 CAMK2DQ13557 499 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 MMEL1Q495T6 779 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 TMEM154Q6P9G4 183 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 TREML4Q6UXN2 200 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 FGFBP3Q8TAT2 258 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 SLC35B4Q969S0 331 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 SLC41A3Q96GZ6 507 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 ULBP2Q9BZM5 246 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 C7orf69Q9H7B7 122 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 CACYBPQ9HB71 228 aaKnown RBP14.29□□□□□ -0.12
USE1-208ENST00000600970 KLHL14Q9P2G3 628 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 OPN4Q9UHM6 478 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 WIPI2Q9Y4P8 454 aa14.29□□□□□ -0.12
USE1-208ENST00000600970 A0A087WUJ7 227 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 IGHV1-69-2A0A0G2JMI3 117 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 SERPINA5P05154 406 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 FAM157BP0CG42 384 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 LSP1P33241 339 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 SLC1A6P48664 564 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 TEKQ02763 1124 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 PCGF3Q3KNV8 242 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 SNX32Q86XE0 403 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 SKA3Q8IX90 412 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 LSMEM1Q8N8F7 131 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 OR6N1Q8NGY5 312 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 DVL3Q92997 716 aaPredicted RBP14.28□□□□□ -0.12
USE1-208ENST00000600970 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 NKIRAS2Q9NYR9 191 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 GPR160Q9UJ42 338 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 GPR45Q9Y5Y3 372 aa14.28□□□□□ -0.12
USE1-208ENST00000600970 IGLV3-9A0A075B6K5 115 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 A0A1B0GWA3 101 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 CLDN25C9JDP6 229 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 ZNF250P15622 560 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 GATA3P23771 443 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 HTR2AP28223 471 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 RAD52P43351 418 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 KLF3P57682 345 aaPredicted RBP14.27□□□□□ -0.13
USE1-208ENST00000600970 SELENOVP59797 346 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 TUSC1Q2TAM9 212 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 GTDC1Q4AE62 458 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 PAQR4Q8N4S7 273 aaPredicted RBP14.27□□□□□ -0.13
USE1-208ENST00000600970 SYNPRQ8TBG9 265 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 SNX33Q8WV41 574 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 ZBTB18Q99592 522 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 C1QTNF5Q9BXJ0 243 aa14.27□□□□□ -0.13
USE1-208ENST00000600970 RSPO3Q9BXY4 272 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms