RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 TSPAN32Q96QS1 320 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 OR52E6Q96RD3 313 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 SLC6A7Q99884 636 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 WFDC6Q9BQY6 131 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 EMC6Q9BV81 110 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 NUF2Q9BZD4 464 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ROPN1BQ9BZX4 212 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 DENND2DQ9H6A0 471 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 ZNF665Q9H7R5 613 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 MEAF6Q9HAF1 191 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ROPN1Q9HAT0 212 aaPredicted RBP5.21□□□□□ -1.58
VRK3-220ENST00000600259 C12orf10Q9HB07 376 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 BCL2L10Q9HD36 194 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PNPOQ9NVS9 261 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 NKIRAS2Q9NYR9 191 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 KLHL14Q9P2G3 628 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 FZR1Q9UM11 496 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 ZNF232Q9UNY5 417 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 PCDHGB1Q9Y5G3 927 aa5.21□□□□□ -1.58
VRK3-220ENST00000600259 TRAV36DV7A0A075B6V5 113 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 A0A087WUJ7 227 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 WDR91A4D1P6 747 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 C17orf100A8MU93 164 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 J3QLI3 93 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 BIRC5O15392 142 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 TPST1O60507 370 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 CDC14BO60729 498 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 MPZL1O95297 269 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 KRT75O95678 551 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 IGHV2-5P01817 119 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 BGLAPP02818 100 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 BCHEP06276 602 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 ARAFP10398 606 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 ANPEPP15144 967 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 HOXB9P17482 250 aaPredicted RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 ADRA2CP18825 462 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 CBLP22681 906 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 SLC1A6P48664 564 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 CRISP3P54108 245 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 DSTNP60981 165 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 SCGB2A2Q13296 93 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 C1DQ13901 141 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 LARS2Q15031 903 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 TRMT5Q32P41 509 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 TMEM255AQ5JRV8 349 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 REP15Q6BDI9 236 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 LRFN4Q6PJG9 635 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 SHISA2Q6UWI4 295 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 PIWIL3Q7Z3Z3 882 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 TRIML2Q8N7C3 387 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 BHLHE22Q8NFJ8 381 aaPredicted RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.2□□□□□ -1.58
VRK3-220ENST00000600259 GTF3AQ92664 365 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 TMEM54Q969K7 222 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 VPS33AQ96AX1 596 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 MOGAT1Q96PD6 335 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 JMJD8Q96S16 334 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 FOXB1Q99853 325 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 TMEM109Q9BVC6 243 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 ZNF416Q9BWM5 594 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 SUCNR1Q9BXA5 334 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 C1QTNF5Q9BXJ0 243 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 WDR55Q9H6Y2 383 aaPredicted RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 TPT1P8Q9HAU6 139 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 SLC52A3Q9NQ40 469 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 HINT3Q9NQE9 182 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 MED29Q9NX70 200 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 MRPL39Q9NYK5 338 aaKnown RBP5.2□□□□□ -1.58
VRK3-220ENST00000600259 CALML5Q9NZT1 146 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 TAAR3PQ9P1P4 343 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 P2RX2Q9UBL9 471 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 DUSP13Q9UII6 198 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 POFUT2Q9Y2G5 429 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 IFT52Q9Y366 437 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 CACNG2Q9Y698 323 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 ARHGAP32A7KAX9 2087 aa5.2□□□□□ -1.58
VRK3-220ENST00000600259 LRRN3E7EW58 273 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 PLPP3O14495 311 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 RFXANKO14593 260 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 PRSS23O95084 383 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 IGHV3-13P01766 116 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 CCL2P13500 99 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 B4GALT1P15291 398 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 NCF2P19878 526 aaPredicted RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 BGNP21810 368 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 ZFP36P26651 326 aaKnown RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 CRATP43155 626 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 CAPZA2P47755 286 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 PTDSS1P48651 473 aaKnown RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 ERVS71-1P61550 626 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 RPS23P62266 143 aaKnown RBP5.19□□□□□ -1.58
VRK3-220ENST00000600259 CCL8P80075 99 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 DEFA6Q01524 100 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 MVKQ03426 396 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 LRRC74AQ0VAA2 488 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 FOXL1Q12952 345 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 CAMK2DQ13557 499 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 RGNQ15493 299 aa5.19□□□□□ -1.58
VRK3-220ENST00000600259 OCLNQ16625 522 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms