RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 HS3ST5Q8IZT8 346 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 ASB10Q8WXI3 467 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 TMEM54Q969K7 222 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 NMD3Q96D46 503 aaKnown RBP12.09□□□□□ -0.47
VRK3-219ENST00000600137 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
VRK3-219ENST00000600137 MUS81Q96NY9 551 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 OR10A4Q9H209 315 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 TXNIPQ9H3M7 391 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 REEP1Q9H902 201 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 ASB6Q9NWX5 421 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 DNAJB9Q9UBS3 223 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 ZNF346Q9UL40 294 aaKnown RBP12.09□□□□□ -0.47
VRK3-219ENST00000600137 TMCC3Q9ULS5 477 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 SAMHD1Q9Y3Z3 626 aaKnown RBP12.09□□□□□ -0.47
VRK3-219ENST00000600137 CACNA1DQ01668 2161 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 UNC119BA6NIH7 251 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 H3BNX3 289 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 SLC43A1O75387 559 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 CIB2O75838 187 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 PGA4P0DJD7 388 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 EPXP11678 715 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 MPGP29372 298 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 KIR2DL3P43628 341 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 CTXN1P60606 82 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 PRPS1P60891 318 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 IL1RL1Q01638 556 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 GK3PQ14409 553 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 ZSCAN26Q16670 478 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 HMBOX1Q6NT76 420 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 IGFN1Q86VF2 1251 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 UBE2J2Q8N2K1 259 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 LINC00471Q8N535 108 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 ZNF519Q8TB69 540 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 GNPDA2Q8TDQ7 276 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
VRK3-219ENST00000600137 ADAD1Q96M93 576 aaKnown RBP12.08□□□□□ -0.48
VRK3-219ENST00000600137 GPX7Q96SL4 187 aaPredicted RBP12.08□□□□□ -0.48
VRK3-219ENST00000600137 HDHD5Q9BXW7 423 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 DGCR6LQ9BY27 220 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 NELFAQ9H3P2 528 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 NRIP3Q9NQ35 241 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 AP4S1Q9Y587 144 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 MAGED1Q9Y5V3 778 aaPredicted RBP12.08□□□□□ -0.48
VRK3-219ENST00000600137 LRBAP50851 2863 aa12.08□□□□□ -0.48
VRK3-219ENST00000600137 SH3D21A4FU49 640 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 TUBAL3A6NHL2 446 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 SIAH2O43255 324 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 TRMUO75648 421 aaKnown RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 CCNB2O95067 398 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 BCL10O95999 233 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 CD14P08571 375 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 PRF1P14222 555 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 LOXP28300 417 aaPredicted RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 DNAJA1P31689 397 aaKnown RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 PEX19P40855 299 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 ZNF133P52736 654 aaPredicted RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 RPL27P61353 136 aaKnown RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 ATP6AP1Q15904 470 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 RFX4Q33E94 735 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 C9orf135Q5VTT2 229 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 CARD17Q5XLA6 110 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 CD300LDQ6UXZ3 194 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 BHLHA15Q7RTS1 189 aaPredicted RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 WDR31Q8NA23 367 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 S100PBPQ96BU1 408 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 DACH2Q96NX9 599 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 ALKBH3Q96Q83 286 aaPredicted RBP12.07□□□□□ -0.48
VRK3-219ENST00000600137 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 KATNB1Q9BVA0 655 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 ACTR6Q9GZN1 396 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 YY1AP1Q9H869 796 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 TAS2R16Q9NYV7 291 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 UPB1Q9UBR1 384 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 REV1Q9UBZ9 1251 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 KCNN3Q9UGI6 736 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 IL20RAQ9UHF4 553 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 CADP27708 2225 aa12.07□□□□□ -0.48
VRK3-219ENST00000600137 IGKV1D-43A0A0B4J1Z2 117 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 A0A1W2PRG6 482 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ARRDC5A6NEK1 342 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ZNF726A6NNF4 738 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 NDUFB2O95178 105 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 TXNDC12O95881 172 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 IGFBP1P08833 259 aaPredicted RBP12.06□□□□□ -0.48
VRK3-219ENST00000600137 COX6B1P14854 86 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ACADSP16219 412 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 PRKACGP22612 351 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ERVK-25P63136 954 aa12.06□□□□□ -0.48
VRK3-219ENST00000600137 ROR2Q01974 943 aaKnown RBP12.06□□□□□ -0.48
VRK3-219ENST00000600137 TAF11Q15544 211 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms