RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	IGFN1	Q86VF2	1251 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	DHRSX	Q8N5I4	330 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	LRRC75A	Q8NAA5	344 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	OR2T33	Q8NG76	320 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	OR8D4	Q8NGM9	314 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF570	Q96NI8	536 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	POLDIP3	Q9BY77	421 aa	Known RBP	19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	BCO1	Q9HAY6	547 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	GP6	Q9HCN6	339 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF629	Q9UEG4	869 aa	Predicted RBP	19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	EMC9	Q9Y3B6	208 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	PTPN13	Q12923	2485 aa		19.5	■□□□□ 0.71
LTBP4-227	ENST00000600026	FAM90A27P	A6NNH2	459 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	GPR171	O14626	319 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	GIPR	P48546	466 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC17A1	Q14916	467 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	PTGES3	Q15185	160 aa	Known RBP	19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	TUSC5	Q8IXB3	177 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	OR9K2	Q8NGE7	335 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	LILRB4	Q8NHJ6	448 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	CA5BP1	Q8WTZ4	195 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	MBOAT4	Q96T53	435 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	TACO1	Q9BSH4	297 aa	Known RBP	19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	KATNB1	Q9BVA0	655 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	ENKD1	Q9H0I2	346 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC25A19	Q9HC21	320 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	NRIP3	Q9NQ35	241 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	EMC3	Q9P0I2	261 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	B3GAT1	Q9P2W7	334 aa		19.49	■□□□□ 0.71
LTBP4-227	ENST00000600026	FLNC	Q14315	2725 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	IGKV3D-15	A0A087WSY6	115 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	DLGAP1	O14490	977 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	AKAP8	O43823	692 aa	Known RBP	19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	CLDN14	O95500	239 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	PPP1R3D	O95685	299 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	NOS3	P29474	1203 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	DAP3	P51398	398 aa	Known RBP	19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC16A1	P53985	500 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	ERVK-25	P63136	954 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	CDK5	Q00535	292 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	TMEM201	Q5SNT2	666 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	EEF1A1P5	Q5VTE0	462 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	TTC23	Q5W5X9	447 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC35D2	Q76EJ3	337 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	OR6K3	Q8NGY3	331 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	CYGB	Q8WWM9	190 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	STARD4	Q96DR4	205 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	ERMAP	Q96PL5	475 aa	Predicted RBP	19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	PRRG3	Q9BZD7	231 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	GRIP2	Q9C0E4	1043 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	TXNIP	Q9H3M7	391 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	FAM118A	Q9NWS6	357 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	GRHPR	Q9UBQ7	328 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	IER3IP1	Q9Y5U9	82 aa		19.48	■□□□□ 0.71
LTBP4-227	ENST00000600026	CACNA1C	Q13936	2221 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	NPIPB13	A6NJU9	1138 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZAR1L	A6NP61	321 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF724	A8MTY0	619 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	NPIPB4	C9JG80	1138 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	BHLHE40	O14503	412 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	IMPA2	O14732	288 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	IDH3B	O43837	385 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	BCL10	O95999	233 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	IGHM	P01871	453 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	HMGN1	P05114	100 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	YES1	P07947	543 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	HLA-DOB	P13765	273 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	APEH	P13798	732 aa	Known RBP	19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	GRK5	P34947	590 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	POLR2I	P36954	125 aa	Known RBP	19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	RPL27	P61353	136 aa	Known RBP	19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	MYBPC1	Q00872	1141 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	TOP3A	Q13472	1001 aa	Predicted RBP	19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	PGGHG	Q32M88	737 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC25A35	Q3KQZ1	300 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	GPR139	Q6DWJ6	353 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	CREB3L2	Q70SY1	520 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	HDDC2	Q7Z4H3	204 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	BTLA	Q7Z6A9	289 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	LNX2	Q8N448	690 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF775	Q96BV0	537 aa	Predicted RBP	19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	ADI1	Q9BV57	179 aa		19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	ZNF346	Q9UL40	294 aa	Known RBP	19.47	■□□□□ 0.71
LTBP4-227	ENST00000600026	USP9X	Q93008	2570 aa	Predicted RBP	19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	LOC100130705	A0A1B0GUX0	176 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	NKX2-6	A6NCS4	301 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	ARPC3	O15145	178 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	TRAF3IP2	O43734	574 aa	Predicted RBP	19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	IFNGR1	P15260	489 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	EPHA2	P29317	976 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	ACKR1	Q16570	336 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLX4IP	Q5VYV7	408 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	TMEM236	Q5W0B7	351 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	FAM205BP	Q63HN1	556 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	CASP12	Q6UXS9	341 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	NUFIP2	Q7Z417	695 aa	Known RBP	19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	IQCF1	Q8N6M8	205 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	OR4Q3	Q8NH05	313 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	SLC38A2	Q96QD8	506 aa		19.46	■□□□□ 0.71
LTBP4-227	ENST00000600026	PIGM	Q9H3S5	423 aa		19.46	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms