RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 IGFN1Q86VF2 1251 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 SLC25A43Q8WUT9 341 aaPredicted RBP11.28□□□□□ -0.6
UPF1-208ENST00000600012 OSTF1Q92882 214 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 DTNBP1Q96EV8 351 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 HRASLS5Q96KN8 279 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 SFXN2Q96NB2 322 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 TUBA1CQ9BQE3 449 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 PIGQQ9BRB3 760 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 FKRPQ9H9S5 495 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 NANSQ9NR45 359 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
UPF1-208ENST00000600012 GALNT8Q9NY28 637 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 IL20Q9NYY1 176 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 AASSQ9UDR5 926 aa11.28□□□□□ -0.6
UPF1-208ENST00000600012 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
UPF1-208ENST00000600012 SH3D21A4FU49 640 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 HTR3EA5X5Y0 456 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 FTCDNL1E5RQL4 147 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 RCBTB2O95199 551 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 PPP1R3DO95685 299 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 INHBBP09529 407 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 ASAH2BP0C7U1 165 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 CD53P19397 219 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 GRPRP30550 384 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 AQP2P41181 271 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
UPF1-208ENST00000600012 CDK5Q00535 292 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 CD47Q08722 323 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 FOXF2Q12947 444 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 IL18R1Q13478 541 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 POU4F3Q15319 338 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 OR7A5Q15622 319 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 CTU2Q2VPK5 515 aaKnown RBP11.27□□□□□ -0.61
UPF1-208ENST00000600012 PGGHGQ32M88 737 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 TMEM176BQ3YBM2 270 aaPredicted RBP11.27□□□□□ -0.61
UPF1-208ENST00000600012 GLYR1Q49A26 553 aaPredicted RBP11.27□□□□□ -0.61
UPF1-208ENST00000600012 EEF1A1P5Q5VTE0 462 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 SHEQ5VZ18 495 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 THAP5Q7Z6K1 395 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 ADGRE4PQ86SQ3 457 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 LUZP2Q86TE4 346 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 OR52L1Q8NGH7 329 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 LIPHQ8WWY8 451 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 WNT2BQ93097 391 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 UBE2FQ969M7 185 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 OR5B2Q96R09 309 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 UCN2Q96RP3 112 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 APOL4Q9BPW4 351 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 PIGMQ9H3S5 423 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 ZNF229Q9UJW7 825 aa11.27□□□□□ -0.61
UPF1-208ENST00000600012 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 MCIDASD6RGH6 385 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 BLOC1S5-TXNDC5H3BN57 136 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 M0R082 166 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 CASKO14936 926 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 OR2T1O43869 369 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 NDUFB2O95178 105 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 RPSAP08865 295 aaKnown RBP11.26□□□□□ -0.61
UPF1-208ENST00000600012 GTF2E2P29084 291 aaKnown RBP11.26□□□□□ -0.61
UPF1-208ENST00000600012 SLC6A6P31641 620 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 GIPRP48546 466 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 MAP2K6P52564 334 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 CDC42P60953 191 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 NKX6-1P78426 367 aaPredicted RBP11.26□□□□□ -0.61
UPF1-208ENST00000600012 SRYQ05066 204 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 RPL13AP3Q6NVV1 102 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 SLC27A4Q6P1M0 643 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 UGT2A3Q6UWM9 527 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 KRTAP1-3Q8IUG1 177 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 ENTHD1Q8IYW4 607 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 OR6S1Q8NH40 331 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 MFSD8Q8NHS3 518 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 ZNF417Q8TAU3 575 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 CNIH3Q8TBE1 160 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
UPF1-208ENST00000600012 ZNF587Q96SQ5 575 aaPredicted RBP11.26□□□□□ -0.61
UPF1-208ENST00000600012 IFT27Q9BW83 186 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 TAPBPLQ9BX59 468 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 POTEKPQ9BYX7 375 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 IMPAD1Q9NX62 359 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 ZNF226Q9NYT6 803 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 TVP23BQ9NYZ1 205 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 HIF3AQ9Y2N7 669 aa11.26□□□□□ -0.61
UPF1-208ENST00000600012 MRPS18CQ9Y3D5 142 aaKnown RBP11.26□□□□□ -0.61
UPF1-208ENST00000600012 A0A1W2PPR1 153 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 FAM171A2A8MVW0 826 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 H0YC42 278 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 BHLHE40O14503 412 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 SEC14L5O43304 696 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 ARHGEF9O43307 516 aa11.25□□□□□ -0.61
UPF1-208ENST00000600012 HIST1H2ABP04908 130 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms