RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 DNAJB12Q9NXW2 375 aaKnown RBP11.48□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF230Q9UIE0 474 aaPredicted RBP11.48□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF337Q9Y3M9 751 aa11.48□□□□□ -0.57
ZNF558-205ENST00000597304 TRAV18A0A075B6X5 111 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 TMEM82A0PJX8 343 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 ARPC3O15145 178 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 DNAJB6O75190 326 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 UPK3AO75631 287 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 OR2F2O95006 317 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 CD8AP01732 235 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 PRSS3P35030 304 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 EFNB2P52799 333 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 OR2F1Q13607 317 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 HFEQ30201 348 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 LINC01590Q5TEZ4 76 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 NKAIN2Q5VXU1 208 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 GLT8D1Q68CQ7 371 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 LEG1Q6P5S2 330 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 ULK3Q6PHR2 472 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 HAGHLQ6PII5 290 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 LINC00114Q6XXX2 140 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 OR2W3Q7Z3T1 314 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 OR51D1Q8NGF3 324 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 EDAQ92838 391 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 FGF13Q92913 245 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 PHYHIPLQ96FC7 376 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 RBM18Q96H35 190 aaKnown RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF471Q9BX82 626 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 WDR13Q9H1Z4 485 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 CAPN10Q9HC96 672 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 SLC22A7Q9Y694 548 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 OR5H14A6NHG9 310 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 H0YC42 278 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 GPR31O00270 319 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 CSRP1P21291 193 aaKnown RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 GPR143P51810 404 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 KIRREL2Q6UWL6 708 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 RAB11FIP2Q7L804 512 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 SLC16A9Q7RTY1 509 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 TMED4Q7Z7H5 227 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 SVBPQ8N300 66 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF511Q8NB15 262 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 CLEC1AQ8NC01 280 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 OR8K3Q8NH51 312 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 TMEM106AQ96A25 262 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 ADAD1Q96M93 576 aaKnown RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF75AQ96N20 296 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 VRK1Q99986 396 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 COMMD4Q9H0A8 199 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 LMAN2LQ9H0V9 348 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 PHPT1Q9NRX4 125 aaPredicted RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 TMEM74BQ9NUR3 256 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 COMMD9Q9P000 198 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 MRM2Q9UI43 246 aaKnown RBP11.47□□□□□ -0.57
ZNF558-205ENST00000597304 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 DOCK9Q9BZ29 2069 aa11.47□□□□□ -0.57
ZNF558-205ENST00000597304 EML5Q05BV3 1969 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF860A6NHJ4 632 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 ZNF432O94892 652 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 MELTFP08582 738 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 POU3F4P49335 361 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 ACTBP60709 375 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 PPIAP62937 165 aaKnown RBP11.46□□□□□ -0.57
ZNF558-205ENST00000597304 ACTG1P63261 375 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 HTRA4P83105 476 aaPredicted RBP11.46□□□□□ -0.57
ZNF558-205ENST00000597304 SSBP1Q04837 148 aaKnown RBP11.46□□□□□ -0.57
ZNF558-205ENST00000597304 SCRN3Q0VDG4 424 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 SFTPA1Q8IWL2 248 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 OR5M8Q8NGP6 311 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 SUSD6Q92537 303 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 SMARCD2Q92925 531 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 LRRC3BQ96PB8 259 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 ZDHHC4Q9NPG8 344 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 KLHDC2Q9Y2U9 406 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 INSL6Q9Y581 213 aa11.46□□□□□ -0.57
ZNF558-205ENST00000597304 OR14I1A6ND48 311 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 FGF17O60258 216 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 CDC40O60508 579 aaKnown RBP eCLIP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 SRPX2O60687 465 aaPredicted RBP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 WNT11O96014 354 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 RORAP35398 523 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 MAP3K8P41279 467 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 UBE2IP63279 158 aaKnown RBP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 SNTB1Q13884 538 aaKnown RBP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 ISXQ2M1V0 245 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 PAN3Q58A45 887 aaKnown RBP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 C11orf87Q6NUJ2 197 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 TMEM88Q6PEY1 159 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 JAZF1Q86VZ6 243 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 GABRG1Q8N1C3 465 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 ZNF676Q8N7Q3 588 aa11.46□□□□□ -0.58
ZNF558-205ENST00000597304 BOLLQ8N9W6 283 aaKnown RBP11.46□□□□□ -0.58
ZNF558-205ENST00000597304 OR4E2Q8NGC2 313 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms