RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 NAAAQ02083 359 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 CAMK2DQ13557 499 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 MST1LQ2TV78 715 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 CYBRD1Q53TN4 286 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 CARD17Q5XLA6 110 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 C8orf82Q6P1X6 216 aaPredicted RBP9.15□□□□□ -0.94
CCDC9-203ENST00000596938 SLC35D2Q76EJ3 337 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 MICU2Q8IYU8 434 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 LRRC17Q8N6Y2 441 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 OR4F15Q8NGB8 312 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 OR6N1Q8NGY5 312 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 LIPHQ8WWY8 451 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 SLC25A44Q96H78 314 aaPredicted RBP9.15□□□□□ -0.94
CCDC9-203ENST00000596938 KCNS3Q9BQ31 491 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 REG4Q9BYZ8 158 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 DENND2DQ9H6A0 471 aaPredicted RBP9.15□□□□□ -0.94
CCDC9-203ENST00000596938 CMTM6Q9NX76 183 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 POFUT2Q9Y2G5 429 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 PMF1-BGLAPU3KQ54 211 aa9.15□□□□□ -0.94
CCDC9-203ENST00000596938 VSTM5A8MXK1 200 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 C11orf98E9PRG8 122 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 NDUFAB1O14561 156 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 RNF13O43567 381 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 PDE5AO76074 875 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TSPAN19P0C672 248 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 FUT1P19526 365 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TNFRSF1BP20333 461 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 SERPINF1P36955 418 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 OR1E2P47887 323 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 BIDP55957 195 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TUBA1BP68363 451 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TUBA4AP68366 448 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 PIN1Q13526 163 aaPredicted RBP9.14□□□□□ -0.95
CCDC9-203ENST00000596938 HACD2Q6Y1H2 254 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 Q71RC1 249 aaPredicted RBP9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TUBA1AQ71U36 451 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 SLC46A3Q7Z3Q1 461 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 PIWIL3Q7Z3Z3 882 aaKnown RBP9.14□□□□□ -0.95
CCDC9-203ENST00000596938 NKAIN4Q8IVV8 208 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 WDFY1Q8IWB7 410 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 POU5F2Q8N7G0 328 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 NUP37Q8NFH4 326 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 OR10H5Q8NGA6 315 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TMEM239Q8WW34 195 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 LZICQ8WZA0 190 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 TMEM54Q969K7 222 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 RHNO1Q9BSD3 238 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 ULBP2Q9BZM5 246 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 CA10Q9NS85 328 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 GLTPQ9NZD2 209 aa9.14□□□□□ -0.95
CCDC9-203ENST00000596938 FBXO9Q9UK97 447 aaPredicted RBP9.14□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF503-AS2A6NEH8 195 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 CENPBD1B2RD01 187 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 B9A039 149 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 BLOC1S5-TXNDC5H3BN57 136 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 KPNA4O00629 521 aaPredicted RBP9.13□□□□□ -0.95
CCDC9-203ENST00000596938 SSX4O60224 188 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ENTPD5O75356 428 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 SERPINI2O75830 405 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 OR7A10O76100 309 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 BCL10O95999 233 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
CCDC9-203ENST00000596938 CALCRP30988 508 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 IFNA8P32881 189 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 CSNK1A1P48729 337 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 EFNA4P52798 201 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 NUDT6P53370 316 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 HGFACQ04756 655 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 LIPEQ05469 1076 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ST3GAL3Q11203 375 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 EFNB3Q15768 340 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ADIPOQQ15848 244 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 HIST3H3Q16695 136 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 LRRC23Q53EV4 343 aaPredicted RBP9.13□□□□□ -0.95
CCDC9-203ENST00000596938 LRFN4Q6PJG9 635 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF813Q6ZN06 617 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 DEF8Q6ZN54 512 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 SPATA21Q7Z572 469 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 MDP1Q86V88 176 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 TREML1Q86YW5 311 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 TMEM255BQ8WV15 326 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF566Q969W8 418 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 CMTM5Q96DZ9 223 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 SGTBQ96EQ0 304 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 TPD52L3Q96J77 140 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF75AQ96N20 296 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 SEPHS2Q99611 448 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 FOXB1Q99853 325 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ELAC2Q9BQ52 826 aaKnown RBP9.13□□□□□ -0.95
CCDC9-203ENST00000596938 MYLK2Q9H1R3 596 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ZNF442Q9H7R0 627 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 A4GNTQ9UNA3 340 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 MED31Q9Y3C7 131 aa9.13□□□□□ -0.95
CCDC9-203ENST00000596938 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
CCDC9-203ENST00000596938 ANK3Q12955 4377 aaKnown RBP9.12□□□□□ -0.95
CCDC9-203ENST00000596938 IGHV2OR16-5A0A0B4J2B6 119 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 A0A1W2PRG6 482 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 MGRN1O60291 552 aa9.12□□□□□ -0.95
CCDC9-203ENST00000596938 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms