RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TTC33Q6PID6 262 aaPredicted RBP11.32□□□□□ -0.6
LIG1-212ENST00000596549 NKAIN4Q8IVV8 208 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 PFN4Q8NHR9 129 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 RCN3Q96D15 328 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 MPP4Q96JB8 637 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 LRR1Q96L50 414 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 FOXB1Q99853 325 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 ECSITQ9BQ95 431 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 ULBP2Q9BZM5 246 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 MRGBPQ9NV56 204 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 B3GNT2Q9NY97 397 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 SH3GLB1Q9Y371 365 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 CAPN7Q9Y6W3 813 aa11.32□□□□□ -0.6
LIG1-212ENST00000596549 CUBNO60494 3623 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 IGHV2OR16-5A0A0B4J2B6 119 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 GPRIN2O60269 458 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 PDE5AO76074 875 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 HLA-HP01893 362 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 FUT4P22083 530 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 PAX7P23759 505 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 OR1E2P47887 323 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 ZP4Q12836 540 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 RAB35Q15286 201 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
LIG1-212ENST00000596549 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 VHLLQ6RSH7 139 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 DEF8Q6ZN54 512 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 SLC35D2Q76EJ3 337 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 NUP37Q8NFH4 326 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 TMEM255BQ8WV15 326 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
LIG1-212ENST00000596549 PROX1Q92786 737 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 TMEM54Q969K7 222 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 SH3GL1Q99961 368 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 NANSQ9NR45 359 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 C20orf141Q9NUB4 165 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 ZNF229Q9UJW7 825 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 ALPK2Q86TB3 2170 aa11.31□□□□□ -0.6
LIG1-212ENST00000596549 PIP5K1CO60331 668 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 IGFBP1P08833 259 aaPredicted RBP11.3□□□□□ -0.6
LIG1-212ENST00000596549 OR4A8P0C604 315 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 PGA4P0DJD7 388 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 PGA3P0DJD8 388 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 ZNF14P17017 642 aaPredicted RBP11.3□□□□□ -0.6
LIG1-212ENST00000596549 ARR3P36575 388 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 CAPZA2P47755 286 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 CSNK1A1P48729 337 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 EFNA4P52798 201 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 SNRPD2P62316 118 aaKnown RBP11.3□□□□□ -0.6
LIG1-212ENST00000596549 PPP2R2BQ00005 443 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 CHRNB3Q05901 458 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 PIN1Q13526 163 aaPredicted RBP11.3□□□□□ -0.6
LIG1-212ENST00000596549 EFNB3Q15768 340 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 MSMPQ1L6U9 139 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 CYBRD1Q53TN4 286 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 ZNF813Q6ZN06 617 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 NANOGNBQ7Z5D8 188 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 PCYOX1LQ8NBM8 494 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 OR2T12Q8NG77 320 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 OR6N1Q8NGY5 312 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 OR6X1Q8NH79 312 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 C10orf105Q8TEF2 133 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 RHNO1Q9BSD3 238 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 PLK3Q9H4B4 646 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 ZNF442Q9H7R0 627 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 MOV10Q9HCE1 1003 aaKnown RBP11.3□□□□□ -0.6
LIG1-212ENST00000596549 CMTM6Q9NX76 183 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 BAG5Q9UL15 447 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 ABCA2Q9BZC7 2435 aa11.3□□□□□ -0.6
LIG1-212ENST00000596549 HIVEP2P31629 2446 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 ZNF726A6NNF4 738 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 SLC22A2O15244 555 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 RNF13O43567 381 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 CD5LO43866 347 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 OR5F1O95221 314 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 MT-ND1P03886 318 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 UMPSP11172 480 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 KDELR2P33947 212 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 THBS4P35443 961 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 SERPINF1P36955 418 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 MDH1P40925 334 aaKnown RBP11.29□□□□□ -0.6
LIG1-212ENST00000596549 RBM34P42696 430 aaKnown RBP11.29□□□□□ -0.6
LIG1-212ENST00000596549 TAS2R41P59536 307 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 LSM11P83369 360 aaKnown RBP eCLIP11.29□□□□□ -0.6
LIG1-212ENST00000596549 RUNX1T1Q06455 604 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
LIG1-212ENST00000596549 SNTB2Q13425 540 aaKnown RBP11.29□□□□□ -0.6
LIG1-212ENST00000596549 GSG1Q2KHT4 349 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
LIG1-212ENST00000596549 TREML1Q86YW5 311 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
LIG1-212ENST00000596549 MICU2Q8IYU8 434 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms