RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CDH12P55289 794 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 TAS2R41P59536 307 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 CBX1P83916 185 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 RAB35Q15286 201 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 HIKESHIQ53FT3 197 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 DEF8Q6ZN54 512 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 CYP4Z1Q86W10 505 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 OR4D11Q8NGI4 311 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 OR1K1Q8NGR3 316 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 SLC7A6OSQ96CW6 309 aaPredicted RBP15.63■□□□□ 0.09
HOMER3-208ENST00000595756 HSH2DQ96JZ2 352 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 TMEM43Q9BTV4 400 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 THTPAQ9BU02 230 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 PRR14Q9BWN1 585 aa15.63■□□□□ 0.09
HOMER3-208ENST00000595756 SVEP1Q4LDE5 3571 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 ARFGEF3Q5TH69 2177 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 EBAG9O00559 213 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 DNAJC8O75937 253 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 KRT33AO76009 404 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 CSF3P09919 207 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 SLC25A16P16260 332 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 ITGA2P17301 1181 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 GTF2E2P29084 291 aaKnown RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 APOBEC3AP31941 199 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 SH3BGRP55822 239 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 EGR4Q05215 589 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 CHRNB3Q05901 458 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 ST3GAL3Q11203 375 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 TRAP1Q12931 704 aaKnown RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 MFSD13AQ14CX5 517 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 TBRG1Q3YBR2 411 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 VTCN1Q7Z7D3 282 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 DHFR2Q86XF0 187 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 RBM45Q8IUH3 476 aaKnown RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 EPHX4Q8IUS5 362 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 OR6S1Q8NH40 331 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 MAGEE2Q8TD90 523 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 ASB9Q96DX5 294 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 SLC41A3Q96GZ6 507 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 PYURFQ96I23 114 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 LINC00470Q9BZP3 86 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 SLC19A3Q9BZV2 496 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 MMADHCQ9H3L0 296 aaPredicted RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 MOV10Q9HCE1 1003 aaKnown RBP15.62■□□□□ 0.09
HOMER3-208ENST00000595756 RCE1Q9Y256 329 aa15.62■□□□□ 0.09
HOMER3-208ENST00000595756 ARPC4-TTLL3A0A0A6YYG9 625 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 CDH2P19022 906 aaPredicted RBP15.61■□□□□ 0.09
HOMER3-208ENST00000595756 TNFRSF1BP20333 461 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 MSX2P35548 267 aaPredicted RBP15.61■□□□□ 0.09
HOMER3-208ENST00000595756 LOXL1Q08397 574 aaPredicted RBP15.61■□□□□ 0.09
HOMER3-208ENST00000595756 C3orf36Q3SXR2 165 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 NIPAL3Q6P499 406 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 TTC33Q6PID6 262 aaPredicted RBP15.61■□□□□ 0.09
HOMER3-208ENST00000595756 LINC00114Q6XXX2 140 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 ZNF525Q8N782 197 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 ANKK1Q8NFD2 765 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 MCUR1Q96AQ8 359 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 PRRC1Q96M27 445 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 SLC38A2Q96QD8 506 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 MDFIQ99750 246 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 KATNB1Q9BVA0 655 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 TRIM15Q9C019 465 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 RIMS3Q9UJD0 308 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 SLC7A7Q9UM01 511 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 FAM32AQ9Y421 112 aaKnown RBP15.61■□□□□ 0.09
HOMER3-208ENST00000595756 PMF1-BGLAPU3KQ54 211 aa15.61■□□□□ 0.09
HOMER3-208ENST00000595756 YLPM1P49750 1951 aaKnown RBP15.6■□□□□ 0.09
HOMER3-208ENST00000595756 TRAV36DV7A0A075B6V5 113 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 IGHV1-18A0A0C4DH31 117 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 HTR3EA5X5Y0 456 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 RBM34P42696 430 aaKnown RBP15.6■□□□□ 0.09
HOMER3-208ENST00000595756 RPS5P46782 204 aaKnown RBP15.6■□□□□ 0.09
HOMER3-208ENST00000595756 EFNA4P52798 201 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 LGALS3BPQ08380 585 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 C6orf52Q5T4I8 152 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 FAM69AQ5T7M9 428 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 LCN8Q6JVE9 175 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 CCDC121Q6ZUS5 278 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 LINGO2Q7L985 606 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 CXXC5Q7LFL8 322 aaKnown RBP15.6■□□□□ 0.09
HOMER3-208ENST00000595756 FAM168AQ92567 244 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 KTI12Q96EK9 354 aaPredicted RBP15.6■□□□□ 0.09
HOMER3-208ENST00000595756 LRGUKQ96M69 825 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 NELFAQ9H3P2 528 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 B3GAT1Q9P2W7 334 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 CRNNQ9UBG3 495 aaPredicted RBP15.6■□□□□ 0.09
HOMER3-208ENST00000595756 MOKQ9UQ07 419 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 ENPP4Q9Y6X5 453 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 ALPK2Q86TB3 2170 aa15.6■□□□□ 0.09
HOMER3-208ENST00000595756 FBN3Q75N90 2809 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 RPL36A-HNRNPH2H7BZ11 118 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 GSC2O15499 205 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 UPK3AO75631 287 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 PDE5AO76074 875 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 ZNF432O94892 652 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 HOXB1P14653 301 aaPredicted RBP15.59■□□□□ 0.09
HOMER3-208ENST00000595756 ZNF43P17038 809 aa15.59■□□□□ 0.09
HOMER3-208ENST00000595756 HOXB6P17509 224 aaKnown RBP15.59■□□□□ 0.09
HOMER3-208ENST00000595756 UBE2NP61088 152 aaKnown RBP15.59■□□□□ 0.09
HOMER3-208ENST00000595756 VLDLRP98155 873 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms