RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 C7orf57Q8NEG2 295 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 GPR148Q8TDV2 347 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
VRK3-209ENST00000594948 OR1F2PQ96R84 312 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 SLC25A32Q9H2D1 315 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 C1orf198Q9H425 327 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 Q9N2J8 555 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 MYOZ1Q9NP98 299 aaPredicted RBP12.06□□□□□ -0.48
VRK3-209ENST00000594948 CYB5R1Q9UHQ9 305 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 TMEM14AQ9Y6G1 99 aa12.06□□□□□ -0.48
VRK3-209ENST00000594948 TMEM72A0PK05 275 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 SLC22A23A1A5C7 686 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 OR6C74A6NCV1 312 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 SULT1C2O00338 296 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 TSPAN9O75954 239 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 CSTAP01040 98 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 ZNF35P13682 527 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 SDHAP31040 664 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 ACTR1BP42025 376 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 MAGEB1P43366 347 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 TNFRSF4P43489 277 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 H2BFSP57053 126 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 ACTR1AP61163 376 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
VRK3-209ENST00000594948 RASGEF1BQ0VAM2 473 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 SFRP5Q5T4F7 317 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 TANGO2Q6ICL3 276 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 C12orf76Q8N812 135 aaPredicted RBP12.05□□□□□ -0.48
VRK3-209ENST00000594948 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 OR52B4Q8NGK2 314 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 ZDHHC1Q8WTX9 485 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 Q96M85 177 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 PELOQ9BRX2 385 aaKnown RBP12.05□□□□□ -0.48
VRK3-209ENST00000594948 ARL6Q9H0F7 186 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 APMAPQ9HDC9 416 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 MPDZO75970 2070 aa12.05□□□□□ -0.48
VRK3-209ENST00000594948 IGKV1D-42A0A075B6H8 117 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TBC1D3DA0A087WVF3 549 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 A0A1B0GVT2 93 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TBC1D3LB9A6J9 549 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 D6RAR5 112 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 GNB5O14775 395 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TSPAN4O14817 238 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 SLC31A1O15431 190 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 SRPX2O60687 465 aaPredicted RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 PRAMEF2O60811 474 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 CTAG2O75638 210 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TBC1D3HP0C7X1 549 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 PTHLHP12272 177 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 IL32P24001 234 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 ADH7P40394 386 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 GPR18Q14330 331 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 ZNF74Q16587 644 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.04□□□□□ -0.48
VRK3-209ENST00000594948 WBP2NLQ6ICG8 309 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TBC1D3CQ6IPX1 549 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TSSK4Q6SA08 328 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 NPSR1Q6W5P4 371 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TBC1D3Q8IZP1 549 aaPredicted RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 ESX1Q8N693 406 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 ZNF511Q8NB15 262 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 RCBTB1Q8NDN9 531 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 OR4N2Q8NGD1 307 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 OR5M1Q8NGP8 315 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 OR2G2Q8NGZ5 317 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 OR10G6Q8NH81 332 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 OR1S1Q8NH92 325 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 CCDC107Q8WV48 283 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 HMGB4Q8WW32 186 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 MCHR2Q969V1 340 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 DNTTIP1Q9H147 329 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 WDR76Q9H967 626 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 SFXN1Q9H9B4 322 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 UPB1Q9UBR1 384 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 KLHDC2Q9Y2U9 406 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 CACNA1IQ9P0X4 2223 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 POM121BA6NF01 834 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 RFPL4AA6NLU0 287 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 A8MUA0 341 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 RFPL4AL1F8VTS6 287 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 H3BUI4 141 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 GOSR2O14653 212 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 TOR1AO14656 332 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 CDC40O60508 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
VRK3-209ENST00000594948 RPP14O95059 124 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 HPP00738 406 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 UBBP0CG47 229 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 UBCP0CG48 685 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 MPGP29372 298 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 GRPRP30550 384 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 KIR2DL1P43626 348 aaPredicted RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 RPS27AP62979 156 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 UBA52P62987 128 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 EIF2B5Q13144 721 aaKnown RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 BTN1A1Q13410 526 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 CCINQ13939 588 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 ZNF660Q6AZW8 331 aaPredicted RBP12.04□□□□□ -0.48
VRK3-209ENST00000594948 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
VRK3-209ENST00000594948 ALKAL2Q6UX46 152 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms