RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MPGP29372 298 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 RPL4P36578 427 aaKnown RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 IST1P53990 364 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 CTXN1P60606 82 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 CAMK2DQ13557 499 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 ACKR1Q16570 336 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF770Q6IQ21 691 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 HDDC2Q7Z4H3 204 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 C20orf196Q8IYI0 205 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF433Q8N7K0 673 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-221ENST00000593026 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 AQP11Q8NBQ7 271 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 LINC01560Q8TB33 94 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 MED18Q9BUE0 208 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 OR10A4Q9H209 315 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 TXNIPQ9H3M7 391 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 CRIM1Q9NZV1 1036 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
DDX39A-221ENST00000593026 PDLIM1O00151 329 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 PTP4A3O75365 173 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 RAD51DO75771 328 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 NDUFB2O95178 105 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 ITGA5P08648 1049 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF26P17031 533 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 GSSP48637 474 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 CSNK1A1P48729 337 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 FOXG1P55316 489 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 ROR2Q01974 943 aaKnown RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 TGFBR3Q03167 851 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 TSPAN31Q12999 210 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF787Q6DD87 383 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 HMBOX1Q6NT76 420 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 OR10G2Q8NGC3 310 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 FANK1Q8TC84 345 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 GIPC3Q8TF64 312 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 FAM222BQ8WU58 562 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 ASB10Q8WXI3 467 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 ZNF566Q969W8 418 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 S100PBPQ96BU1 408 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 SLC25A44Q96H78 314 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 LRR1Q96L50 414 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 DACH2Q96NX9 599 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 WFIKKN1Q96NZ8 548 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 USB1Q9BQ65 265 aaKnown RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 B3GAT2Q9NPZ5 323 aa13.15□□□□□ -0.3
DDX39A-221ENST00000593026 STX18Q9P2W9 335 aaKnown RBP13.15□□□□□ -0.3
DDX39A-221ENST00000593026 NAV2Q8IVL1 2488 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 M0R3G1 203 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 GASTP01350 101 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 IGHG1P01857 330 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 IGHMP01871 453 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 PGA4P0DJD7 388 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 PGA3P0DJD8 388 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 EPXP11678 715 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 FCGR1AP12314 374 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 CDH2P19022 906 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-221ENST00000593026 FASP25445 335 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 ARHGDIAP52565 204 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
DDX39A-221ENST00000593026 ARMC4Q5T2S8 1044 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 FAM205BPQ63HN1 556 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 SMARCD3Q6STE5 483 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 TMEM179BQ7Z7N9 219 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 C1orf162Q8NEQ5 155 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-221ENST00000593026 NOXO1Q8NFA2 376 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
DDX39A-221ENST00000593026 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 ZC3HAV1LQ96H79 300 aaKnown RBP13.14□□□□□ -0.31
DDX39A-221ENST00000593026 KATNB1Q9BVA0 655 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 ULBP2Q9BZM5 246 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 CRLF2Q9HC73 371 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 GPR35Q9HC97 309 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 MGAT4BQ9UQ53 548 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 MAST4O15021 2626 aa13.14□□□□□ -0.31
DDX39A-221ENST00000593026 ARRDC5A6NEK1 342 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 A6NIZ1 184 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 RPL36A-HNRNPH2H7BZ11 118 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 CASKO14936 926 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 CD14P08571 375 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ACADSP16219 412 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 SH3BGRP55822 239 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-221ENST00000593026 CLRN1P58418 232 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 FXYD6P3P58550 94 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 RAP1BP61224 184 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 RAP1AP62834 184 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ERVK-25P63136 954 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 STK11Q15831 433 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 GABRA6Q16445 453 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 CEACAM16Q2WEN9 425 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 OR7E24Q6IFN5 339 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 THSD4Q6ZMP0 1018 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms