RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 RUNX1T1Q06455 604 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 TRAP1Q12931 704 aaKnown RBP13.42□□□□□ -0.26
TRIM47-206ENST00000592942 PPA1Q15181 289 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 STK11Q15831 433 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 BEX5Q5H9J7 111 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 MTX3Q5HYI7 312 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 NCMAPQ5T1S8 102 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 CARD17Q5XLA6 110 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 ALKBH2Q6NS38 261 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 ZNF730Q6ZMV8 503 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 NANOGNBQ7Z5D8 188 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 OR1K1Q8NGR3 316 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 OR52N5Q8NH56 324 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 OR52J3Q8NH60 311 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 LILRB1Q8NHL6 650 aaPredicted RBP13.42□□□□□ -0.26
TRIM47-206ENST00000592942 TMEM54Q969K7 222 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 PLPPR2Q96GM1 343 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 SEPHS2Q99611 448 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 GPA33Q99795 319 aa13.42□□□□□ -0.26
TRIM47-206ENST00000592942 CADP27708 2225 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 SH3PXD2BA1X283 911 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 ZNF726A6NNF4 738 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 ZNF587BE7ETH6 402 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 M0R3G1 203 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 FABP3P05413 133 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 CDH2P19022 906 aaPredicted RBP13.41□□□□□ -0.26
TRIM47-206ENST00000592942 LIMS1P48059 325 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 HMGA2P52926 109 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 MELKQ14680 651 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 HIKESHIQ53FT3 197 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 LRFN4Q6PJG9 635 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 ABHD12BQ7Z5M8 362 aaPredicted RBP13.41□□□□□ -0.26
TRIM47-206ENST00000592942 ZDHHC21Q8IVQ6 265 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 C17orf78Q8N4C9 275 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 OR51A7Q8NH64 312 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 CCDC124Q96CT7 223 aaKnown RBP13.41□□□□□ -0.26
TRIM47-206ENST00000592942 MUCL1Q96DR8 90 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 ADAD1Q96M93 576 aaKnown RBP13.41□□□□□ -0.26
TRIM47-206ENST00000592942 MRPL13Q9BYD1 178 aaKnown RBP13.41□□□□□ -0.26
TRIM47-206ENST00000592942 CRLF2Q9HC73 371 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 POLQO75417 2590 aa13.41□□□□□ -0.26
TRIM47-206ENST00000592942 TRAV27A0A087WT01 109 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 EFCAB9A8MZ26 197 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 CLOCKO15516 846 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 AKAP8O43823 692 aaKnown RBP13.4□□□□□ -0.26
TRIM47-206ENST00000592942 KRT33AO76009 404 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 PGA4P0DJD7 388 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 PGA3P0DJD8 388 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 GPR4P46093 362 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 RIPPLY3P57055 190 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 ARF1P84077 181 aaKnown RBP13.4□□□□□ -0.26
TRIM47-206ENST00000592942 TGFBR3Q03167 851 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 ACKR1Q16570 336 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 HIST3H3Q16695 136 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 CEACAM16Q2WEN9 425 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 TBRG1Q3YBR2 411 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 ZER1Q7Z7L7 766 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 OR4K5Q8NGD3 323 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 OR13C2Q8NGS9 318 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 MAGEE2Q8TD90 523 aaPredicted RBP13.4□□□□□ -0.26
TRIM47-206ENST00000592942 ASB10Q8WXI3 467 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 SLC25A44Q96H78 314 aaPredicted RBP13.4□□□□□ -0.26
TRIM47-206ENST00000592942 ZNF347Q96SE7 839 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 MAGIXQ9H6Y5 334 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 ROS1P08922 2347 aa13.4□□□□□ -0.26
TRIM47-206ENST00000592942 NPIPB13A6NJU9 1138 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 NPIPB4C9JG80 1138 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 GADD45GO95257 159 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 BCL10O95999 233 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 SAGP10523 405 aaPredicted RBP13.39□□□□□ -0.27
TRIM47-206ENST00000592942 RRM2P31350 389 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 SLC9A3P48764 834 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 NR1H2P55055 460 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 FXYD6P3P58550 94 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 SPIBQ01892 262 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ANKDD1AQ495B1 522 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ALG10Q5BKT4 473 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 FBXW10Q5XX13 1052 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 HMBOX1Q6NT76 420 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ANKRD16Q6P6B7 361 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 SSX8Q7RTT4 187 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 OAFQ86UD1 273 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ADGRG5Q8IZF4 528 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 OR4C15Q8NGM1 316 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 NMD3Q96D46 503 aaKnown RBP13.39□□□□□ -0.27
TRIM47-206ENST00000592942 FAM46AQ96IP4 442 aaKnown RBP13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ALPK1Q96QP1 1244 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 C1QTNF6Q9BXI9 259 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 TXNIPQ9H3M7 391 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 GLTPQ9NZD2 209 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ST6GALNAC2Q9UJ37 374 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 ZNF346Q9UL40 294 aaKnown RBP13.39□□□□□ -0.27
TRIM47-206ENST00000592942 POMPQ9Y244 141 aa13.39□□□□□ -0.27
TRIM47-206ENST00000592942 SIGLEC7Q9Y286 467 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms