RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 DGCR2P98153 550 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 CRYZQ08257 329 aaKnown RBP12.97□□□□□ -0.33
RANBP3-229ENST00000592771 TP53I3Q53FA7 332 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 ELFN2Q5R3F8 820 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 APOOLQ6UXV4 268 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF441Q8N8Z8 693 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 OR1N1Q8NGS0 311 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 PIGKQ92643 395 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 SORCS2Q96PQ0 1159 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 FSCN3Q9NQT6 498 aa12.97□□□□□ -0.33
RANBP3-229ENST00000592771 OR6C76A6NM76 312 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 SCDO00767 359 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 GPR171O14626 319 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 SHOXO15266 292 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 LAMTOR5O43504 91 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 TGM6O95932 706 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 UBL4AP11441 157 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 SNRPBP14678 240 aaKnown RBP12.96□□□□□ -0.33
RANBP3-229ENST00000592771 HIST1H1CP16403 213 aaKnown RBP12.96□□□□□ -0.33
RANBP3-229ENST00000592771 SLC6A19Q695T7 634 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 FCRLBQ6BAA4 426 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 HDDC2Q7Z4H3 204 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 KCTD20Q7Z5Y7 419 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 NAT6Q93015 286 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 ZFP3Q96NJ6 502 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 CITED4Q96RK1 184 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 FBXL4Q9UKA2 621 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 MKL2Q9ULH7 1088 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.33
RANBP3-229ENST00000592771 MPDZO75970 2070 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 TECTAO75443 2155 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 IGKV1D-42A0A075B6H8 117 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 IGHV5-10-1A0A0J9YXX1 117 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 A0A1W2PQ72 361 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 LEUTXA8MZ59 168 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 GABARAPH6UMI1 98 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 M0R296 226 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 AIPO00170 330 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 TSPAN2O60636 221 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 PEX14O75381 377 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 CRYZL1O95825 349 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ONECUT2O95948 504 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 RAB40ALP0C0E4 278 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 SRMP19623 302 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 C4BPBP20851 252 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 EDNRAP25101 427 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 MNDAP41218 407 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 CCR9P51686 369 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 PRPS1P60891 318 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ATG4DQ86TL0 474 aaPredicted RBP12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ZNF680Q8NEM1 530 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 RAB40AQ8WXH6 277 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ZMYND19Q96E35 227 aaPredicted RBP12.96□□□□□ -0.34
RANBP3-229ENST00000592771 GPX7Q96SL4 187 aaPredicted RBP12.96□□□□□ -0.34
RANBP3-229ENST00000592771 DDOQ99489 341 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 NMNAT2Q9BZQ4 307 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 WWTR1Q9GZV5 400 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 NANSQ9NR45 359 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 NCDNQ9UBB6 729 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ZNF337Q9Y3M9 751 aa12.96□□□□□ -0.34
RANBP3-229ENST00000592771 ARPC4-TTLL3A0A0A6YYG9 625 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 TEX51A0A1B0GUA7 166 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 A0A1B0GVC2 190 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 A6NIN4 97 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 AGRPO00253 132 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 KHNYNO15037 678 aaKnown RBP12.95□□□□□ -0.34
RANBP3-229ENST00000592771 ZNF264O43296 627 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 IFNA7P01567 189 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 GYPBP06028 91 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 HPGDP15428 266 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 GDNFP39905 211 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 CAMK2DQ13557 499 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 PRSS58Q8IYP2 241 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 GATSQ8NAP1 163 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 OR4K13Q8NH42 304 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 STT3BQ8TCJ2 826 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 PHOSPHO1Q8TCT1 267 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 GIMAP1Q8WWP7 306 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 ZC3H10Q96K80 434 aaKnown RBP12.95□□□□□ -0.34
RANBP3-229ENST00000592771 GAL3ST4Q96RP7 486 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 GAREM1Q9H706 876 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 COPS7AQ9UBW8 275 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
RANBP3-229ENST00000592771 A0A1W2PQD3 144 aa12.94□□□□□ -0.34
RANBP3-229ENST00000592771 TUBAL3A6NHL2 446 aa12.94□□□□□ -0.34
RANBP3-229ENST00000592771 ZNF593O00488 134 aaPredicted RBP12.94□□□□□ -0.34
RANBP3-229ENST00000592771 ICOSLGO75144 302 aa12.94□□□□□ -0.34
RANBP3-229ENST00000592771 TIAF1O95411 115 aa12.94□□□□□ -0.34
RANBP3-229ENST00000592771 LDOC1O95751 146 aaPredicted RBP12.94□□□□□ -0.34
RANBP3-229ENST00000592771 CALCBP10092 127 aa12.94□□□□□ -0.34
RANBP3-229ENST00000592771 PNMTP11086 282 aa12.94□□□□□ -0.34
RANBP3-229ENST00000592771 APEHP13798 732 aaKnown RBP12.94□□□□□ -0.34
RANBP3-229ENST00000592771 MST1P26927 711 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms