RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	MRGPRG	Q86SM5	289 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	IQCF1	Q8N6M8	205 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	OR6X1	Q8NH79	312 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	HDAC2	Q92769	488 aa	Known RBP	10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	NMD3	Q96D46	503 aa	Known RBP	10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051		Q96M85	177 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	MRPL13	Q9BYD1	178 aa	Known RBP	10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	RNPEPL1	Q9HAU8	725 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	SLC7A10	Q9NS82	523 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	RCE1	Q9Y256	329 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051	IER3IP1	Q9Y5U9	82 aa		10.02	□□□□□ -0.81
CIRBP-236	ENST00000592051		A0A1W2PRG6	482 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	NKX2-6	A6NCS4	301 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051		A8MXE2	369 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ARPC3	O15145	178 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	MRPL33	O75394	65 aa	Known RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	BCL10	O95999	233 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	IGHV3-9	P01782	118 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	PEX2	P28328	305 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	SLC6A6	P31641	620 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	RPL4	P36578	427 aa	Known RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ARHGDIA	P52565	204 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	SMS	P52788	366 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	RPL27	P61353	136 aa	Known RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	SLC34A1	Q06495	639 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	TOP3A	Q13472	1001 aa	Predicted RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	CAMK2D	Q13557	499 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	TRIP10	Q15642	601 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	MEST	Q5EB52	335 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	CLEC12A	Q5QGZ9	265 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	CARD17	Q5XLA6	110 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ACSM5	Q6NUN0	579 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	NIPAL3	Q6P499	406 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	CASP12	Q6UXS9	341 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	C20orf196	Q8IYI0	205 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	GABRG1	Q8N1C3	465 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	PARP8	Q8N3A8	854 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ARIH2OS	Q8N7S6	290 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ASB5	Q8WWX0	329 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	TMEM54	Q969K7	222 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	RASD2	Q96D21	266 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	ZNF837	Q96EG3	531 aa	Predicted RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	DDO	Q99489	341 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	TSSK6	Q9BXA6	273 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	POLDIP3	Q9BY77	421 aa	Known RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	PROCR	Q9UNN8	238 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	POFUT2	Q9Y2G5	429 aa		10.01	□□□□□ -0.81
CIRBP-236	ENST00000592051	UTP20	O75691	2785 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	MYO7B	Q6PIF6	2116 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	DOCK7	Q96N67	2140 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	TEX13C	A0A0J9YWL9	993 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	FAM90A27P	A6NNH2	459 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051		H0YHG0	523 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	DVL2	O14641	736 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	MSTN	O14793	375 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	TRMU	O75648	421 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	SMNDC1	O75940	238 aa	Known RBP eCLIP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	SLC2A10	O95528	541 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ATP6V1G2	O95670	118 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	PGA4	P0DJD7	388 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	PGA3	P0DJD8	388 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	APEH	P13798	732 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	AGA	P20933	346 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	IGFBP5	P24593	272 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	GRN	P28799	593 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ACVR1B	P36896	505 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	CDKN2A	P42771	156 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	GIPR	P48546	466 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ALDH3A2	P51648	485 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	CRISP1	P54107	249 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	CDK5	Q00535	292 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	TFF3	Q07654	80 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	GINS1	Q14691	196 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	HIST3H3	Q16695	136 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	LRRC36	Q1X8D7	754 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	TMEM236	Q5W0B7	351 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	LRFN4	Q6PJG9	635 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ZBTB49	Q6ZSB9	765 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	PTCHD4	Q6ZW05	846 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ZNF100	Q8IYN0	542 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	LNX2	Q8N448	690 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	MAGEE2	Q8TD90	523 aa	Predicted RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	DNAJC9	Q8WXX5	260 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	APH1A	Q96BI3	265 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	SLC25A44	Q96H78	314 aa	Predicted RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ERMAP	Q96PL5	475 aa	Predicted RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	MBOAT4	Q96T53	435 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	KCNK17	Q96T54	332 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	RBM4B	Q9BQ04	359 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	C9orf16	Q9BUW7	83 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	IFT27	Q9BW83	186 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	RBM4	Q9BWF3	364 aa	Known RBP	10	□□□□□ -0.81
CIRBP-236	ENST00000592051	GABARAPL3	Q9BY60	117 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	PIGM	Q9H3S5	423 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	ZNF556	Q9HAH1	456 aa		10	□□□□□ -0.81
CIRBP-236	ENST00000592051	KRT84	Q9NSB2	600 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms