RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 KATNB1Q9BVA0 655 aa13.23□□□□□ -0.29
ERCC1-213ENST00000592023 POLR2J2Q9GZM3 115 aaKnown RBP13.23□□□□□ -0.29
ERCC1-213ENST00000592023 NSRP1Q9H0G5 558 aaKnown RBP13.23□□□□□ -0.29
ERCC1-213ENST00000592023 POLR2J3Q9H1A7 115 aaKnown RBP13.23□□□□□ -0.29
ERCC1-213ENST00000592023 CRNNQ9UBG3 495 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-213ENST00000592023 RIMS3Q9UJD0 308 aa13.23□□□□□ -0.29
ERCC1-213ENST00000592023 AP3M1Q9Y2T2 418 aa13.23□□□□□ -0.29
ERCC1-213ENST00000592023 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 FAM171A2A8MVW0 826 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 PIP5K1CO60331 668 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 OR7A10O76100 309 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 IGLV1-44P01699 117 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 MT-ND1P03886 318 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 HIST1H2ABP04908 130 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 ASAH2BP0C7U1 165 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-213ENST00000592023 B4GALT1P15291 398 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 RBM34P42696 430 aaKnown RBP13.22□□□□□ -0.29
ERCC1-213ENST00000592023 VHLLQ6RSH7 139 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 ZNF813Q6ZN06 617 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 HIST3H2AQ7L7L0 130 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 MDP1Q86V88 176 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 TMEM239Q8WW34 195 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 LZICQ8WZA0 190 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 HIST1H2ACQ93077 130 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 SGTBQ96EQ0 304 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 LRR1Q96L50 414 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 PRRC1Q96M27 445 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 ADAD1Q96M93 576 aaKnown RBP13.22□□□□□ -0.29
ERCC1-213ENST00000592023 EFCAB1Q9HAE3 211 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 BARX1Q9HBU1 254 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-213ENST00000592023 C20orf141Q9NUB4 165 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 TAS2R5Q9NYW4 299 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 POFUT2Q9Y2G5 429 aa13.22□□□□□ -0.29
ERCC1-213ENST00000592023 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 BLOC1S5-TXNDC5H3BN57 136 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 CXCR6O00574 342 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 GSTA4O15217 222 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 SSX4O60224 188 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 ZNF682O95780 498 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 IGKV3-15P01624 115 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 HLA-HP01893 362 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 CBR1P16152 277 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 PAX7P23759 505 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 CALCRP30988 508 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 APOBEC3AP31941 199 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-213ENST00000592023 YAP1P46937 504 aaKnown RBP13.21□□□□□ -0.29
ERCC1-213ENST00000592023 GSK3BP49841 420 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 NUDT6P53370 316 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 SELENOWP63302 87 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 RPL18Q07020 188 aaKnown RBP13.21□□□□□ -0.29
ERCC1-213ENST00000592023 ZP4Q12836 540 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-213ENST00000592023 VTCN1Q7Z7D3 282 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 MAPK1IP1LQ8NDC0 245 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 FBXO17Q96EF6 278 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 POM121Q96HA1 1249 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 FOXB1Q99853 325 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-213ENST00000592023 MYLK2Q9H1R3 596 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 NOX3Q9HBY0 568 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 MOV10Q9HCE1 1003 aaKnown RBP13.21□□□□□ -0.29
ERCC1-213ENST00000592023 MED31Q9Y3C7 131 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 MTORP42345 2549 aa13.21□□□□□ -0.29
ERCC1-213ENST00000592023 HEATR1Q9H583 2144 aaKnown RBP13.21□□□□□ -0.3
ERCC1-213ENST00000592023 MCIDASD6RGH6 385 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 SNX3O60493 162 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 F13BP05160 661 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 THRBP10828 461 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 CD79AP11912 226 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 HOXB4P17483 251 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-213ENST00000592023 FUT1P19526 365 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 DRD4P21917 467 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 LSP1P33241 339 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 ARR3P36575 388 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 GYS2P54840 703 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 C3orf36Q3SXR2 165 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 HACD2Q6Y1H2 254 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 FAM169BQ8N8A8 192 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 OR6X1Q8NH79 312 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 TMEM54Q969K7 222 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 ZNF566Q969W8 418 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 FAM162AQ96A26 154 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 HSH2DQ96JZ2 352 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 KCTD14Q9BQ13 255 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-213ENST00000592023 CA10Q9NS85 328 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 GLTPQ9NZD2 209 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 A4GNTQ9UNA3 340 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 PLCE1Q9P212 2302 aa13.2□□□□□ -0.3
ERCC1-213ENST00000592023 IGHV2OR16-5A0A0B4J2B6 119 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 H7C417 338 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 J3KTA2 159 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 BCL10O95999 233 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 SERPINA1P01009 418 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 IFNW1P05000 195 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 PGA4P0DJD7 388 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 PGA3P0DJD8 388 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 NCK1P16333 377 aa13.19□□□□□ -0.3
ERCC1-213ENST00000592023 IFNA8P32881 189 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms