RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TSSK2Q96PF2 358 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF304Q9HCX3 659 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 A0A1W2PS29 197 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 B8ZZF3 427 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 CDC42EP2O14613 210 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TRAPPC6AO75865 159 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF43P17038 809 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 SFTPDP35247 375 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TRAPPC6BQ86SZ2 158 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TP53I13Q8NBR0 393 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 FOXRED1Q96CU9 486 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 DERL3Q96Q80 235 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 ST6GALNAC5Q9BVH7 336 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TSPAN10Q9H1Z9 355 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 EXO1Q9UQ84 846 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 IFITM5A6NNB3 132 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 M0QYG6 137 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 RFXAPO00287 272 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TNFRSF10CO14798 259 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 CALCBP10092 127 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 TDGQ13569 410 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 B3GAT2Q9NPZ5 323 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 RNF215Q9Y6U7 377 aa15.7■□□□□ 0.1
SMARCA4-215ENST00000590574 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 RBMXL2O75526 392 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF806P0C7X5 589 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 HERV-K104P61576 105 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 RNLSQ5VYX0 342 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 KANSL1Q7Z3B3 1105 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 MARCH3Q86UD3 253 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 RCBTB1Q8NDN9 531 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 SLC22A8Q8TCC7 542 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 NECAB3Q96P71 396 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 OR5B2Q96R09 309 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 SAV1Q9H4B6 383 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 KCNIP3Q9Y2W7 256 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 P2RX6O15547 441 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 KNG1P01042 644 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 S100A11P31949 105 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 POLR2HP52434 150 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 DCAF7P61962 342 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 TNK1Q13470 666 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 RAET1LQ5VY80 246 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 ZC3H10Q96K80 434 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 LRFN5Q96NI6 719 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 NUDT22Q9BRQ3 303 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 ZMAT3Q9HA38 289 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 HYAL3O43820 417 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF84P51523 738 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 AADACL4Q5VUY2 407 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 SLC41A2Q96JW4 573 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 LPAR4Q99677 370 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 SIGLEC7Q9Y286 467 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 EMC9Q9Y3B6 208 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 UBBP0CG47 229 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 UBCP0CG48 685 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 TAS2R20P59543 309 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 RPS27AP62979 156 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 UBA52P62987 128 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 PRSS53Q2L4Q9 553 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 OR51S1Q8NGJ8 323 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 SENP5Q96HI0 755 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 NRSN2Q9GZP1 204 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 ERVMER34-1Q9H9K5 563 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 QPCTLQ9NXS2 382 aa15.69■□□□□ 0.1
SMARCA4-215ENST00000590574 LOC100289279A0A1B0GTE1 492 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF850A8MQ14 1090 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 RFX2P48378 723 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 BTG2P78543 158 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 MC2RQ01718 297 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 NKAIN2Q5VXU1 208 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ABHD12BQ7Z5M8 362 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 SLC23A1Q9UHI7 598 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 NYNRINQ9P2P1 1898 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 TMED7-TICAM2A0A0A6YYA0 188 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 SDHBP21912 280 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 CCNOP22674 350 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 GLYATL3Q5SZD4 288 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 KIRREL2Q6UWL6 708 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF680Q8NEM1 530 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 OR4N2Q8NGD1 307 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 TRMT61AQ96FX7 289 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 SEC22AQ96IW7 307 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 GPA33Q99795 319 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ZNF700Q9H0M5 742 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 DHCR7Q9UBM7 475 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 TMED7Q9Y3B3 224 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 F8W036 122 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 PVALBP20472 110 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 MMP15P51511 669 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 TAS2R31P59538 309 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 BLOC1S1P78537 153 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 HSD11B2P80365 405 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 CYCSP99999 105 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 COX15Q7KZN9 410 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 SLC46A1Q96NT5 459 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 TRAV1-2A0A0B4J238 106 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 LALBAP00709 142 aa15.68■□□□□ 0.1
SMARCA4-215ENST00000590574 ST6GAL1P15907 406 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms