RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 MS4A18Q3C1V0 323 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 CHRFAM7AQ494W8 412 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 ERICH5Q6P6B1 374 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 TUBA1AQ71U36 451 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 IL17RDQ8NFM7 739 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 OR2T12Q8NG77 320 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 TAMM41Q96BW9 452 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 LRR1Q96L50 414 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 HOPXQ9BPY8 73 aaPredicted RBP12.48□□□□□ -0.41
MBD1-220ENST00000589758 TMEM43Q9BTV4 400 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 MRPL39Q9NYK5 338 aaKnown RBP12.48□□□□□ -0.41
MBD1-220ENST00000589758 TAGLN3Q9UI15 199 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 NOX1Q9Y5S8 564 aa12.48□□□□□ -0.41
MBD1-220ENST00000589758 ALPK2Q86TB3 2170 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 ZNF99A8MXY4 864 aaPredicted RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 NME4O00746 187 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 TRAF3IP2O43734 574 aaPredicted RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 FMO6PO60774 539 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 BGLAPP02818 100 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 C8BP07358 591 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 OR4A8P0C604 315 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 CDH12P55289 794 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 LSM11P83369 360 aaKnown RBP eCLIP12.47□□□□□ -0.41
MBD1-220ENST00000589758 MXRA7P84157 204 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 DUSP7Q16829 419 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 ZNF613Q6PF04 617 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 HACD2Q6Y1H2 254 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 CXXC5Q7LFL8 322 aaKnown RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 MICU2Q8IYU8 434 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 ANKS4BQ8N8V4 417 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 NANOS1Q8WY41 292 aaKnown RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 MCHR1Q99705 422 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 VRK1Q99986 396 aaPredicted RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 WFDC6Q9BQY6 131 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 PLK3Q9H4B4 646 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 ZNF442Q9H7R0 627 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
MBD1-220ENST00000589758 ANK3Q12955 4377 aaKnown RBP12.47□□□□□ -0.41
MBD1-220ENST00000589758 JMJD1CQ15652 2540 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ZANQ9Y493 2812 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ELOVL7A1L3X0 281 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ZNF726A6NNF4 738 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 M0R3H8 397 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 GSTA4O15217 222 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 TPST2O60704 377 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 MT-ATP6P00846 226 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ERCC1P07992 297 aaPredicted RBP12.46□□□□□ -0.41
MBD1-220ENST00000589758 CD247P20963 164 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 CALCRP30988 508 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 PPOXP50336 477 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 POU3F1Q03052 451 aaPredicted RBP12.46□□□□□ -0.41
MBD1-220ENST00000589758 PUDPQ08623 228 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 PMS2P3Q13401 168 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 LRRC23Q53EV4 343 aaPredicted RBP12.46□□□□□ -0.41
MBD1-220ENST00000589758 C8orf82Q6P1X6 216 aaPredicted RBP12.46□□□□□ -0.41
MBD1-220ENST00000589758 VHLLQ6RSH7 139 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 CCDC80Q76M96 950 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 FITM2Q8N6M3 262 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 C10orf53Q8N6V4 93 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ZNF540Q8NDQ6 660 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ZNF837Q96EG3 531 aaPredicted RBP12.46□□□□□ -0.41
MBD1-220ENST00000589758 KCNK17Q96T54 332 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 RAB1BQ9H0U4 201 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 AP3M1Q9Y2T2 418 aa12.46□□□□□ -0.41
MBD1-220ENST00000589758 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.42
MBD1-220ENST00000589758 LOC390937A0A1W2PQ73 354 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 SLC35F4A4IF30 521 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 VWC2LB2RUY7 222 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 M0R3G1 203 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 CHP2O43745 196 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 LY6HO94772 140 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 HPRP00739 348 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 NR4A2P43354 598 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 CAPZA2P47755 286 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 GSK3BP49841 420 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 GZMKP49863 264 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 IDH3GP51553 393 aaPredicted RBP12.45□□□□□ -0.42
MBD1-220ENST00000589758 HGFACQ04756 655 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 PHYHD1Q5SRE7 291 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 CARD17Q5XLA6 110 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 LINC00114Q6XXX2 140 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 ZNF627Q7L945 461 aa12.45□□□□□ -0.42
MBD1-220ENST00000589758 PXKQ7Z7A4 578 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms