RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 GUSBP08236 651 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 TFPTP0C1Z6 253 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 ZCCHC18P0CG32 403 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 PTNP21246 168 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 IGHV1-2P23083 117 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 PPIBP23284 216 aaKnown RBP7.24□□□□□ -1.25
DNMT1-219ENST00000589349 PCYT1AP49585 367 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 BSPH1Q075Z2 132 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 SQLEQ14534 574 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 CYP51A1Q16850 503 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 ZSWIM7Q19AV6 140 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 BEAN1Q3B7T3 259 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 PRAMEF8Q5VWM4 474 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 PRAMEF7Q5VXH5 474 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 FBXW9Q5XUX1 488 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 KLHL17Q6TDP4 642 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 CLEC9AQ6UXN8 241 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 AAED1Q7RTV5 226 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 SERPINA11Q86U17 422 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 GABRG1Q8N1C3 465 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 OR52E4Q8NGH9 312 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 BBS10Q8TAM1 723 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 SLC26A7Q8TE54 656 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 GTF2H4Q92759 462 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 TRMT61AQ96FX7 289 aaKnown RBP7.24□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF607Q96SK3 696 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 NEU1Q99519 415 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 KCNS3Q9BQ31 491 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 POTEKPQ9BYX7 375 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 PAIP1Q9H074 479 aaKnown RBP7.24□□□□□ -1.25
DNMT1-219ENST00000589349 CXXC4Q9H2H0 198 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 CORO2BQ9UQ03 480 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 TRAPPC4Q9Y296 219 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 SLC9A8Q9Y2E8 581 aa7.24□□□□□ -1.25
DNMT1-219ENST00000589349 CDHR4A6H8M9 788 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 A8MVM7 634 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 H7C1Q1 480 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 ABCD4O14678 606 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 ZNF208O43345 1280 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 RAMP1O60894 148 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 GCM2O75603 506 aaPredicted RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 SERPINB7O75635 380 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 PGM3O95394 542 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 VIMP08670 466 aaKnown RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 PRG2P13727 222 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 NQO1P15559 274 aaKnown RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 GCSHP23434 173 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 ZFP36P26651 326 aaKnown RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 RPS5P46782 204 aaKnown RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 PTH2RP49190 550 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 RPS4XP62701 263 aaKnown RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 CDK6Q00534 326 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 TGFBR3Q03167 851 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 FADDQ13158 208 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 SCARB2Q14108 478 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 MMEL1Q495T6 779 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 HSP90B2PQ58FF3 399 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 C1orf140Q5VVS0 124 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 REEP3Q6NUK4 255 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 NIPAL3Q6P499 406 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 FITM2Q8N6M3 262 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM99Q8N816 258 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 FAM71CQ8NEG0 241 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 KBTBD8Q8NFY9 601 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 OR9K2Q8NGE7 335 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 SMAP2Q8WU79 429 aaPredicted RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 NEUROG1Q92886 237 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 RAB24Q969Q5 203 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 CLPTM1LQ96KA5 538 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 C18orf12Q96KH6 178 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 MAGEB18Q96M61 343 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 HS6ST2Q96MM7 605 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 SMR3AQ99954 134 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 OR10A4Q9H209 315 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 TMEM27Q9HBJ8 222 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 A4GALTQ9NPC4 353 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 TAS2R16Q9NYV7 291 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 CISD1Q9NZ45 108 aaKnown RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 LEF1Q9UJU2 399 aaPredicted RBP7.23□□□□□ -1.25
DNMT1-219ENST00000589349 ANGPT4Q9Y264 503 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 NDUFAF1Q9Y375 327 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 DCHS2Q6V1P9 2916 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 PDZD2O15018 2839 aa7.23□□□□□ -1.25
DNMT1-219ENST00000589349 MED13LQ71F56 2210 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 PRORSD1PA6NEY8 169 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 TRIM64A6NGJ6 449 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 TRIM64BA6NI03 449 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 DNPH1O43598 174 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 SERPINI2O75830 405 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 TROVE2P10155 538 aaKnown RBP eCLIP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 RPS4Y1P22090 263 aaKnown RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 EDNRAP25101 427 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 CDKN1AP38936 164 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 ACAA2P42765 397 aaKnown RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 CAPZA2P47755 286 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 MAP2K6P52564 334 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 CDH11P55287 796 aa7.22□□□□□ -1.25
DNMT1-219ENST00000589349 RGS8P57771 180 aaPredicted RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 UBE2NP61088 152 aaKnown RBP7.22□□□□□ -1.25
DNMT1-219ENST00000589349 VEZF1Q14119 521 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms