RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	OR5W2	Q8NH69	310 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	PTP4A1	Q93096	173 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	UPRT	Q96BW1	309 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	LRR1	Q96L50	414 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	KCTD7	Q96MP8	289 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	DEFB126	Q9BYW3	111 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	IFT22	Q9H7X7	185 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	HEXA-AS1	Q9H8Q6	139 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	SCPEP1	Q9HB40	452 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	FAM86C1	Q9NVL1	165 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	TCFL5	Q9UL49	500 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	GPR52	Q9Y2T5	361 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	MAB21L2	Q9Y586	359 aa		13.97	□□□□□ -0.17
DDX39A-209	ENST00000589318	FAM25E	A8MYX2	175 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	LRRN3	E7EW58	273 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	RAB40AL	P0C0E4	278 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	PNMT	P11086	282 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	TCN2	P20062	427 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	STOM	P27105	288 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	EGR4	Q05215	589 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZNF91	Q05481	1191 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	HNRNPA0	Q13151	305 aa	Known RBP	13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	STPG1	Q5TH74	334 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	CD276	Q5ZPR3	534 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	TMEM81	Q6P7N7	255 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	SMARCD3	Q6STE5	483 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	ATP6V1C2	Q8NEY4	427 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	ZNF582	Q96NG8	517 aa	Predicted RBP	13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC38A2	Q96QD8	506 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	RASL10B	Q96S79	203 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	SLC19A3	Q9BZV2	496 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	MCCC2	Q9HCC0	563 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	MMP25	Q9NPA2	562 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	NLK	Q9UBE8	527 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	FREM2	Q5SZK8	3169 aa		13.96	□□□□□ -0.17
DDX39A-209	ENST00000589318	AHCTF1	Q8WYP5	2266 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	C7orf66	A4D0T2	115 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	GMFG	O60234	142 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	RCBTB2	O95199	551 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	SLC2A10	O95528	541 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	TGM6	O95932	706 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	FBXO45	P0C2W1	286 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	P2RX1	P51575	399 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	STK11	Q15831	433 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	EXT1	Q16394	746 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	ELOA3B	Q3SY89	546 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	C3orf38	Q5JPI3	329 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	HACD4	Q5VWC8	232 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	RPL13AP3	Q6NVV1	102 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	MZT2A	Q6P582	158 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	PPP1R32	Q7Z5V6	425 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	OAF	Q86UD1	273 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	LNX2	Q8N448	690 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	NANOGP1	Q8N7R0	232 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	ELOA3	Q8NG57	546 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	OR51A7	Q8NH64	312 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	M1AP	Q8TC57	530 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	DUSP19	Q8WTR2	217 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	TNFRSF13C	Q96RJ3	184 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	GSX2	Q9BZM3	304 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	GALNT9	Q9HCQ5	603 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	ISYNA1	Q9NPH2	558 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	TXNL4B	Q9NX01	149 aa	Known RBP	13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	GSTK1	Q9Y2Q3	226 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	RPL36	Q9Y3U8	105 aa	Known RBP	13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	HRH3	Q9Y5N1	445 aa		13.96	□□□□□ -0.18
DDX39A-209	ENST00000589318	DMXL1	Q9Y485	3027 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	EML6	Q6ZMW3	1958 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF292	O60281	2723 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	IGF2	P01344	180 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	CD63	P08962	238 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	RAB3A	P20336	220 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	TACR3	P29371	465 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	PTGDS	P41222	190 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	NTRK2	Q16620	822 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	NUP54	Q7Z3B4	507 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	MISP	Q8IVT2	679 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF563	Q8TA94	476 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	GPR119	Q8TDV5	335 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	SGTB	Q96EQ0	304 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	LRFN3	Q9BTN0	628 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	SHARPIN	Q9H0F6	387 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZFP64	Q9NPA5	681 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	MED17	Q9NVC6	651 aa		13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.95	□□□□□ -0.18
DDX39A-209	ENST00000589318	C2orf72	A6NCS6	295 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	KDM4E	B2RXH2	506 aa	Predicted RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	MASP2	O00187	686 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	IGHE	P01854	428 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	HMGN1	P05114	100 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	CPE	P16870	476 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	BMP7	P18075	431 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	PGC	P20142	388 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	ITPKB	P27987	946 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	DBP	Q10586	325 aa	Predicted RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	EXOSC2	Q13868	293 aa	Known RBP	13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	CBFB	Q13951	182 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	ZNF273	Q14593	569 aa		13.94	□□□□□ -0.18
DDX39A-209	ENST00000589318	AADACL4	Q5VUY2	407 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms