RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 AQP8O94778 261 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 RUNX1T1Q06455 604 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 OCLNQ16625 522 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 KLHL12Q53G59 568 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 MEDAGQ5VYS4 303 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 ZNF585AQ6P3V2 769 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 NHLRC1Q6VVB1 395 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 NPEPL1Q8NDH3 523 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 BBS1Q8NFJ9 593 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 ZNF519Q8TB69 540 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 ZPLD1Q8TCW7 415 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 HDAC2Q92769 488 aaKnown RBP12.92□□□□□ -0.34
NPC1-207ENST00000588867 PTP4A1Q93096 173 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 ZNF582Q96NG8 517 aaPredicted RBP12.92□□□□□ -0.34
NPC1-207ENST00000588867 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 HCAR1Q9BXC0 346 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 OR51V1Q9H2C8 321 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 GTF3C1Q12789 2109 aa12.92□□□□□ -0.34
NPC1-207ENST00000588867 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 FAM20BO75063 409 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 RENP00797 406 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 GYPBP06028 91 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 TPOP07202 933 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 CLUP10909 449 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SLC16A1P53985 500 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 CAMK2DQ13557 499 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 POU4F3Q15319 338 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 ABLIM2Q6H8Q1 611 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 FGD2Q7Z6J4 655 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 WDFY1Q8IWB7 410 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SYT14Q8NB59 555 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 ZNF385AQ96PM9 386 aaKnown RBP12.91□□□□□ -0.34
NPC1-207ENST00000588867 RERGLQ9H628 205 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SRA1Q9HD15 236 aaKnown RBP12.91□□□□□ -0.34
NPC1-207ENST00000588867 RPRD1BQ9NQG5 326 aaKnown RBP12.91□□□□□ -0.34
NPC1-207ENST00000588867 MYRFQ9Y2G1 1151 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 A6NIZ1 184 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 NPIPB13A6NJU9 1138 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SLC22A20A6NK97 555 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 NPIPB4C9JG80 1138 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 PTGES3LE9PB15 166 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SLC1A7O00341 560 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 TGM6O95932 706 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 TDGF1P3P51864 188 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 RAP1BP61224 184 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
NPC1-207ENST00000588867 RAP1AP62834 184 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SLC25A30Q5SVS4 291 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 NXNL2Q5VZ03 156 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 PCSK4Q6UW60 755 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 P4HA3Q7Z4N8 544 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 MCEMP1Q8IX19 187 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 RNF128Q8TEB7 428 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SYT4Q9H2B2 425 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 SCN3BQ9NY72 215 aa12.91□□□□□ -0.34
NPC1-207ENST00000588867 TLN1Q9Y490 2541 aaKnown RBP12.9□□□□□ -0.34
NPC1-207ENST00000588867 PRSS37A4D1T9 235 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 EIF4E1BA6NMX2 242 aaKnown RBP12.9□□□□□ -0.34
NPC1-207ENST00000588867 AHRRA9YTQ3 701 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 KDM4EB2RXH2 506 aaPredicted RBP12.9□□□□□ -0.34
NPC1-207ENST00000588867 TRMUO75648 421 aaKnown RBP12.9□□□□□ -0.34
NPC1-207ENST00000588867 ABOP16442 354 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 EEF1B2P24534 225 aaKnown RBP12.9□□□□□ -0.34
NPC1-207ENST00000588867 CDH11P55287 796 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
NPC1-207ENST00000588867 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 AADACL4Q5VUY2 407 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 GFRALQ6UXV0 394 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 ADCK1Q86TW2 530 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 ZIC4Q8N9L1 334 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 TSSK2Q96PF2 358 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 DDOQ99489 341 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 KLHL9Q9P2J3 617 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 CLEC4AQ9UMR7 237 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
NPC1-207ENST00000588867 SNTNA6NMZ2 147 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 PRODHO43272 600 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 TNFAIP8O95379 198 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 CRHBPP24387 322 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 CLRN1P58418 232 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 CXCR4P61073 352 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 TEKQ02763 1124 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 APOFQ13790 326 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 FAM205BPQ63HN1 556 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 GTF2IRD2BQ6EKJ0 949 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 B3GLCTQ6Y288 498 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 HDDC2Q7Z4H3 204 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 GTF2IRD2Q86UP8 949 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 OR6X1Q8NH79 312 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 RFKQ969G6 155 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
NPC1-207ENST00000588867 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms