RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CCNIQ14094 377 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 OR1Q1Q15612 314 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 BLOC1S3Q6QNY0 202 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 NHLRC1Q6VVB1 395 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 TLCD1Q96CP7 247 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 SPDL1Q96EA4 605 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 C1orf159Q96HA4 380 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 TXNDC15Q96J42 360 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 ULBP2Q9BZM5 246 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 IKZF5Q9H5V7 419 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 TMEM27Q9HBJ8 222 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 TCF7L2Q9NQB0 619 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF224Q9NZL3 707 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 POFUT2Q9Y2G5 429 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 GMEB1Q9Y692 573 aa16.67■□□□□ 0.26
TRAF4-216ENST00000586813 TRBV5-3A0A0A0MS03 114 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 PRORSD1PA6NEY8 169 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 LRRN3E7EW58 273 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 POLR3GO15318 223 aaPredicted RBP16.66■□□□□ 0.26
TRAF4-216ENST00000586813 TCF21O43680 179 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 C8BP07358 591 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 AQP1P29972 269 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 SRP14P37108 136 aaKnown RBP16.66■□□□□ 0.26
TRAF4-216ENST00000586813 PTDSS1P48651 473 aaKnown RBP16.66■□□□□ 0.26
TRAF4-216ENST00000586813 AQP5P55064 265 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 SCARB2Q14108 478 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 TRMT5Q32P41 509 aaKnown RBP16.66■□□□□ 0.26
TRAF4-216ENST00000586813 PAGE3Q5JUK9 113 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 UGT2A3Q6UWM9 527 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 OR6N1Q8NGY5 312 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 FOXB1Q99853 325 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 SYT3Q9BQG1 590 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 WFDC6Q9BQY6 131 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 TMEM43Q9BTV4 400 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 TMEM38AQ9H6F2 299 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 REV1Q9UBZ9 1251 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 SLC13A4Q9UKG4 626 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 SPEF1Q9Y4P9 236 aa16.66■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF726A6NNF4 738 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 TPST2O60704 377 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 SLC6A2P23975 617 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 GLRXP35754 106 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 DVL1P1P54792 670 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-216ENST00000586813 CDH12P55289 794 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 SWT1Q5T5J6 900 aaKnown RBP16.65■□□□□ 0.26
TRAF4-216ENST00000586813 RINLQ6ZS11 566 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 PXKQ7Z7A4 578 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 RANBP3LQ86VV4 465 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-216ENST00000586813 SNX32Q86XE0 403 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 C10orf53Q8N6V4 93 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 BHLHE22Q8NFJ8 381 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-216ENST00000586813 C7orf26Q96N11 449 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 ZNF607Q96SK3 696 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 DENND2DQ9H6A0 471 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-216ENST00000586813 SLC52A3Q9NQ40 469 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 CORO2BQ9UQ03 480 aa16.65■□□□□ 0.26
TRAF4-216ENST00000586813 PLPP3O14495 311 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 SERPINB7O75635 380 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 SERPINI2O75830 405 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 UBL3O95164 117 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 RAB36O95755 333 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 GPX2P18283 190 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 AHCYP23526 432 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 ALDH3B1P43353 468 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 GIPRP48546 466 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 GALK2Q01415 458 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 FXNQ16595 210 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 ELFN2Q5R3F8 820 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 GKAP1Q5VSY0 366 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-216ENST00000586813 ARMC8Q8IUR7 673 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 EBF4Q9BQW3 602 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 MS4A5Q9H3V2 200 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 EVA1AQ9H8M9 152 aa16.64■□□□□ 0.25
TRAF4-216ENST00000586813 MYEF2Q9P2K5 600 aaKnown RBP16.64■□□□□ 0.25
TRAF4-216ENST00000586813 B4DSR2 109 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 MFN2O95140 757 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 TGDSO95455 350 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 MT-ATP6P00846 226 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 HPXP02790 462 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 ITGA2P17301 1181 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 TCN1P20061 433 aaPredicted RBP16.63■□□□□ 0.25
TRAF4-216ENST00000586813 PCMT1P22061 227 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 CSNK1A1P48729 337 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 IDH3AP50213 366 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 RPS23P62266 143 aaKnown RBP16.63■□□□□ 0.25
TRAF4-216ENST00000586813 RAB1AP62820 205 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 MAD2L1BPQ15013 274 aaPredicted RBP16.63■□□□□ 0.25
TRAF4-216ENST00000586813 HIPK4Q8NE63 616 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 OR5J2Q8NH18 312 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 TMBIM4Q9HC24 238 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.63■□□□□ 0.25
TRAF4-216ENST00000586813 FBXL3Q9UKT7 428 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 FZR1Q9UM11 496 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 ANGPT4Q9Y264 503 aa16.63■□□□□ 0.25
TRAF4-216ENST00000586813 EVPLLA8MZ36 301 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 M0R3H8 397 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 GPR6P46095 362 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-216ENST00000586813 SEC24CP53992 1094 aa16.62■□□□□ 0.25
TRAF4-216ENST00000586813 BIDP55957 195 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms