RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 OR5M1Q8NGP8 315 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 OR2V1Q8NHB1 315 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 POC1BQ8TC44 478 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SNX33Q8WV41 574 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 UFD1Q92890 307 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 UBE2FQ969M7 185 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 MUL1Q969V5 352 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 LGALS12Q96DT0 336 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 FAM122AQ96E09 287 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 SCMH1Q96GD3 660 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ARL5BQ96KC2 179 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 Q96M85 177 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 OXGR1Q96P68 337 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 RBP7Q96R05 134 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ARHGAP9Q9BRR9 750 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ALG12Q9BV10 488 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ZNF552Q9H707 407 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 FGF20Q9NP95 211 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 FKBP14Q9NWM8 211 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 PAK1IP1Q9NWT1 392 aaPredicted RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 SEC14L4Q9UDX3 406 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 LAMP5Q9UJQ1 280 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 ZNF346Q9UL40 294 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 PCDHGA9Q9Y5G4 932 aaKnown RBP5.56□□□□□ -1.52
LIG3-206ENST00000586058 FKBP7Q9Y680 259 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 KCNMB2Q9Y691 235 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 KNTC1P50748 2209 aa5.56□□□□□ -1.52
LIG3-206ENST00000586058 MUC6Q6W4X9 2439 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 GPR179Q6PRD1 2367 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TRGV5A0A0B4J1U4 118 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 A0A0G2JMM0 328 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 A0A1W2PPB8 328 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 A0A1W2PPL8 197 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 A0A1W2PRS3 328 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 PRSS37A4D1T9 235 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 HSPB2A8KAH6 182 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 C12orf71A8MTZ7 269 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 KIR3DP1A8MWS1 328 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 GPR171O14626 319 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ADAM10O14672 748 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SLC22A1O15245 554 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 KRT33AO76009 404 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 INMTO95050 263 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 CRYABP02511 175 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 MT-ND5P03915 603 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 GYPBP06028 91 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 MRPL3P09001 348 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 TACSTD2P09758 323 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SBK2P0C263 348 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 OR2T7P0C7T2 308 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 IMPDH2P12268 514 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 IFNGR1P15260 489 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 PSMA1P25786 263 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 GSTT1P30711 240 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 RFC3P40938 356 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 NAA10P41227 235 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 MAGEA5P43359 124 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SLC15A1P46059 708 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ZNF84P51523 738 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TMBIM6P55061 237 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 BIDP55957 195 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 CARD18P57730 90 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 RAC3P60763 192 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 PIGFQ07326 219 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 GGTLC2Q14390 218 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ZNF169Q14929 603 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 POU4F3Q15319 338 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SPHARQ15513 63 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TRAM1Q15629 374 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 HSPB2Q16082 182 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 MESTQ5EB52 335 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ARMCX4Q5H9R4 360 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 SYT6Q5T7P8 510 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 GPR107Q5VW38 600 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 RNLSQ5VYX0 342 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 KCTD18Q6PI47 426 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 SHFQ7M4L6 423 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 FAM122BQ7Z309 247 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 P4HA3Q7Z4N8 544 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 BCDIN3DQ7Z5W3 292 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 ERI1Q8IV48 349 aaKnown RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 SLC35F2Q8IXU6 374 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 GHDCQ8N2G8 530 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TMEM251Q8N6I4 163 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 AMER2Q8N7J2 671 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 TMEM99Q8N816 258 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ZFP62Q8NB50 900 aaPredicted RBP5.55□□□□□ -1.52
LIG3-206ENST00000586058 BBS1Q8NFJ9 593 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 KBTBD8Q8NFY9 601 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 OR13F1Q8NGS4 319 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 OR6N1Q8NGY5 312 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 OR6N2Q8NGY6 317 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 OR2T27Q8NH04 317 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 OR52N1Q8NH53 320 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 PRR7Q8TB68 274 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 FAR1Q8WVX9 515 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ASB10Q8WXI3 467 aa5.55□□□□□ -1.52
LIG3-206ENST00000586058 ABTB1Q969K4 478 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms