RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 TMX2-CTNND1H3BSU7 103 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 ARPC3O15145 178 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 NEMFO60524 1076 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 PLEKP08567 350 aaPredicted RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 CASQ1P31415 396 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KIR2DS4P43632 304 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 CSNK1DP48730 415 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 SARNPP82979 210 aaKnown RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 REG3AQ06141 175 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 PLD1Q13393 1074 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KIAA0087Q14695 138 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 MICBQ29980 383 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 LRRC10Q5BKY1 277 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 GPR157Q5UAW9 335 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 CASC1Q6TDU7 716 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 GET4Q7L5D6 327 aaPredicted RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 ITPRIPQ8IWB1 547 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KIR2DL5AQ8N109 375 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 CNPY4Q8N129 248 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 ZNF786Q8N393 782 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 MDS2Q8NDY4 140 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KIR2DL5BQ8NHK3 375 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 MARCH1Q8TCQ1 289 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 UFD1Q92890 307 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 ITCHQ96J02 903 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 CLCC1Q96S66 551 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 PAIP2Q9BPZ3 127 aaKnown RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 PLA2G2FQ9BZM2 168 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 NHEJ1Q9H9Q4 299 aaPredicted RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 PATZ1Q9HBE1 687 aaKnown RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 THUMPD1Q9NXG2 353 aaKnown RBP2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 KCNIP1Q9NZI2 227 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 TP53TG5Q9Y2B4 290 aa2.34□□□□□ -2.03
RPRD1A-203ENST00000585879 NSD2O96028 1365 aa2.34□□□□□ -2.04
RPRD1A-203ENST00000585879 RGPD8O14715 1765 aaPredicted RBP2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CD163L1Q9NR16 1453 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 KIF20BQ96Q89 1820 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 TUBGCP6Q96RT7 1819 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CPS1P31327 1500 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 USP32Q8NFA0 1604 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 TCRBV9S1A1TA0A576 114 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 LOC110117498-PIK3R3F6TDL0 507 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 H0YCG3 227 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 PES1O00541 588 aaKnown RBP2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 RIPK2O43353 540 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 RAMP3O60896 148 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 POU2F1P14859 743 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 ABOP16442 354 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CRISP2P16562 243 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 GLP1RP43220 463 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 KLRB1Q12918 225 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 MADCAM1Q13477 382 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 PTGES3Q15185 160 aaKnown RBP2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 DUSP7Q16829 419 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CCDC152Q4G0S7 254 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 XKR4Q5GH76 650 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 MARCH8Q5T0T0 291 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 PDZK1Q5T2W1 519 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 ATAD3BQ5T9A4 648 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 OR52W1Q6IF63 320 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 PAQR7Q86WK9 346 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 EGFL6Q8IUX8 553 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 VSTM4Q8IW00 320 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 MFSD9Q8NBP5 474 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CCDC112Q8NEF3 446 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 DTX3LQ8TDB6 740 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 EFHD2Q96C19 240 aaPredicted RBP2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 STARD4Q96DR4 205 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 FAM210AQ96ND0 272 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 TSGA13Q96PP4 275 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 SLC38A2Q96QD8 506 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 RAB34Q9BZG1 259 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 SMOXQ9NWM0 555 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CTNNA3Q9UI47 895 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 MMP17Q9ULZ9 603 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 ATP6V1DQ9Y5K8 247 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 SLC25A15Q9Y619 301 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 C3P01024 1663 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 SHPRHQ149N8 1683 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 CCDC171Q6TFL3 1326 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 MAP3K15Q6ZN16 1313 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 UBR1Q8IWV7 1749 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 FAM135BQ49AJ0 1406 aa2.33□□□□□ -2.04
RPRD1A-203ENST00000585879 ITSN1Q15811 1721 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 ANKRD26Q9UPS8 1709 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 IGHV3-64DA0A0J9YX35 117 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 C12orf77C9JDV5 145 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 ANKRD63C9JTQ0 380 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 C11orf94C9JXX5 98 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 MAGEB3O15480 346 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 SCGNO76038 276 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 SLC25A27O95847 323 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 NCK1P16333 377 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 EIF2S2P20042 333 aaKnown RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 U2AF2P26368 475 aaKnown RBP eCLIP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 GNA11P29992 359 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 OTX2P32243 289 aa2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 ARRB1P49407 418 aaPredicted RBP2.32□□□□□ -2.04
RPRD1A-203ENST00000585879 LHX2P50458 406 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms