RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.3□□□□□ -0.927e-7■□□□□ 9.5
RFFL-212ENST00000584655 TRIM36Q9NQ86 728 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 ZNF223Q9UK11 482 aaPredicted RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 DKKL1Q9UK85 242 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 ZGRF1Q86YA3 2104 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 WNK2Q9Y3S1 2297 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 A0A087WUJ7 227 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 PRR32B1ATL7 298 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 BHLHE40O14503 412 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 KRT33AO76009 404 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CER1O95813 267 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 THBS1P07996 1170 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CRYBB2P43320 205 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 CD83Q01151 205 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 MFAP5Q13361 173 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 WIPI1Q5MNZ9 446 aaPredicted RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 RHBDD2Q6NTF9 364 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 C19orf18Q8NEA5 215 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 TOR1AIP2Q8NFQ8 470 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 FAM71F1Q96KD3 344 aaPredicted RBP9.3□□□□□ -0.92
RFFL-212ENST00000584655 SPSB2Q99619 263 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 ELOVL3Q9HB03 270 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 NLKQ9UBE8 527 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 MYOTQ9UBF9 498 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 PLCE1Q9P212 2302 aa9.3□□□□□ -0.92
RFFL-212ENST00000584655 SMLR1H3BR10 107 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 SULT2B1O00204 365 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 ZFAND5O76080 213 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 SCG5P05408 212 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 AVPR2P30518 371 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 DLSTP36957 453 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 FOLR3P41439 243 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 TIPARPQ7Z3E1 657 aaKnown RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 FAM220AQ7Z4H9 259 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 RPS19BP1Q86WX3 136 aaKnown RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 RASL10BQ96S79 203 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 MMP25Q9NPA2 562 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 NOX4Q9NPH5 578 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 CGGBP1Q9UFW8 167 aaPredicted RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 ACAD8Q9UKU7 415 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 HSPE1-MOB4S4R3N1 261 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 LY6G6EA0A0G2JKS1 128 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 ARGFXA6NJG6 315 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 VSTM2BA6NLU5 285 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 MYL9P24844 172 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 CCL11P51671 97 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 SKP2Q13309 424 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 SFRP4Q6FHJ7 346 aaPredicted RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 OR5H6Q8NGV6 325 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 PHF21AQ96BD5 680 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 CYYR1Q96J86 154 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 B3GNT4Q9C0J1 378 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 SRPK3Q9UPE1 567 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 U3KQA8 63 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 IGKV1D-43A0A0B4J1Z2 117 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 A0A0G2JMP0 313 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 A0A0X1KG70 313 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 OR7A10O76100 309 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 RENP00797 406 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 ZNF823P16415 610 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 SLC26A5P58743 744 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 DEFA1P59665 94 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 DEFA3P59666 94 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 RAB40BQ12829 278 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 ZNF74Q16587 644 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 KLHL26Q53HC5 615 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 CCBE1Q6UXH8 406 aaPredicted RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 LINGO2Q7L985 606 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 ATCAYQ86WG3 371 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 OR4M2Q8NGB6 313 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 DNAJA4Q8WW22 397 aaPredicted RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 ADIPOR1Q96A54 375 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 GPN2Q9H9Y4 310 aaPredicted RBP9.29□□□□□ -0.92
RFFL-212ENST00000584655 SLC25A19Q9HC21 320 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 CMC2Q9NRP2 79 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 COQ3Q9NZJ6 369 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 EMC9Q9Y3B6 208 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 PCDHGB6Q9Y5F9 930 aa9.29□□□□□ -0.92
RFFL-212ENST00000584655 DSPPQ9NZW4 1301 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 SLC22A31A6NKX4 558 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 LMX1BO60663 402 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 SP9P0CG40 484 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 JUNBP17275 347 aaPredicted RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 DPP4P27487 766 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 HTR1FP30939 366 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 SLC15A1P46059 708 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 IRF3Q14653 427 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 KIAA2026Q5HYC2 2103 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 MANEAQ5SRI9 462 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 ZNF362Q5T0B9 420 aaPredicted RBP9.28□□□□□ -0.92
RFFL-212ENST00000584655 DCAF12Q5T6F0 453 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 NXNL2Q5VZ03 156 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TRILQ7L0X0 811 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 WDFY1Q8IWB7 410 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 OR10H5Q8NGA6 315 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 OR14A16Q8NHC5 309 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 FCGR1BQ92637 280 aa9.28□□□□□ -0.92
RFFL-212ENST00000584655 TMCO6Q96DC7 493 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms