RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 FOXC2Q99958 501 aa11.04□□□□□ -0.64
SMARCE1-218ENST00000582955 ULBP2Q9BZM5 246 aa11.04□□□□□ -0.64
SMARCE1-218ENST00000582955 NDUFAF4Q9P032 175 aa11.04□□□□□ -0.64
SMARCE1-218ENST00000582955 AKAP9Q99996 3911 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 OTOGQ6ZRI0 2925 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 A0A087WUU8 490 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 A0A1W2PRG6 482 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 HTR3EA5X5Y0 456 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 EFCAB9A8MZ26 197 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 MCIDASD6RGH6 385 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 SEC14L2O76054 403 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 DIRAS1O95057 198 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 BCL10O95999 233 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 H1F0P07305 194 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 RHCEP18577 417 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 PTAFRP25105 342 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 TUBA1BP68363 451 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 TUBA4AP68366 448 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 VLDLRP98155 873 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 TUBA1AQ71U36 451 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 TRPM8Q7Z2W7 1104 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 TSEN54Q7Z6J9 526 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 CDK20Q8IZL9 346 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 OR6X1Q8NH79 312 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 MOSPD2Q8NHP6 518 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 LIPHQ8WWY8 451 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 BCL2L2Q92843 193 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 NEUROG1Q92886 237 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 PIGTQ969N2 578 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 ZNF566Q969W8 418 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 MCUR1Q96AQ8 359 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 ZNF837Q96EG3 531 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 LRR1Q96L50 414 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 NMNAT1Q9HAN9 279 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 OBP2BQ9NPH6 170 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 INIPQ9NRY2 104 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 POU2F3Q9UKI9 436 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 MGAT4BQ9UQ53 548 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 POFUT2Q9Y2G5 429 aa11.03□□□□□ -0.64
SMARCE1-218ENST00000582955 ZNF99A8MXY4 864 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 PDE5AO76074 875 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ITGA2P17301 1181 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 MAKP20794 623 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 CD40P25942 277 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 GPR4P46093 362 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 CAPZA2P47755 286 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 DAP3P51398 398 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 CDH11P55287 796 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 CLRN1P58418 232 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 PRKCDQ05655 676 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 SPOCK1Q08629 439 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 LAPTM4AQ15012 233 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 TESK1Q15569 626 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ALG10Q5BKT4 473 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 C1QTNF12Q5T7M4 302 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 TBPL2Q6SJ96 375 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC22A25Q6T423 547 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 CYP2R1Q6VVX0 501 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 MBOAT2Q6ZWT7 520 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 RNF113BQ8IZP6 322 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ARHGAP24Q8N264 748 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF611Q8N823 705 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 LILRB1Q8NHL6 650 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 MAGEE2Q8TD90 523 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 FBXW5Q969U6 566 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC25A44Q96H78 314 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 BOD1Q96IK1 185 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ALPK1Q96QP1 1244 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 PIP5K1AQ99755 562 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 NELFAQ9H3P2 528 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ANKRD19PQ9H560 264 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 BEX4Q9NWD9 120 aaPredicted RBP11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ACTR3BQ9P1U1 418 aa11.02□□□□□ -0.65
SMARCE1-218ENST00000582955 ROS1P08922 2347 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 TRAV27A0A087WT01 109 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 A0A1W2PRQ8 180 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 SHISA9B4DS77 424 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 SMPD2O60906 423 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 IGHG1P01857 330 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 FABP3P05413 133 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 ATP6V1B2P21281 511 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 SPIBQ01892 262 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 TOP3AQ13472 1001 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 DGCR6Q14129 220 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 PODNL1Q6PEZ8 512 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF813Q6ZN06 617 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 OAFQ86UD1 273 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 OR13C2Q8NGS9 318 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 OR52J3Q8NH60 311 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 OR51A7Q8NH64 312 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC7A13Q8TCU3 470 aa11.01□□□□□ -0.65
SMARCE1-218ENST00000582955 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms