RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ZNF300	Q96RE9	604 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	NR1H4	Q96RI1	486 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	CDRT15	Q96T59	188 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	MRPL57	Q9BQC6	102 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	OR10A5	Q9H207	317 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	P2RY12	Q9H244	342 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	IKZF5	Q9H5V7	419 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	WDR41	Q9HAD4	459 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	MEAF6	Q9HAF1	191 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	SAP30L	Q9HAJ7	183 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	NOX3	Q9HBY0	568 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	GIMAP2	Q9UG22	337 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	EGFL7	Q9UHF1	273 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	PRPF19	Q9UMS4	504 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	MED16	Q9Y2X0	877 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM96B	Q9Y3D0	163 aa		3.96	□□□□□ -1.78
MSI2-216	ENST00000582772		A0A087WZY1	265 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	LRIT2	A6NDA9	550 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF879	B4DU55	563 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	SHISA8	B8ZZ34	492 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ERI3	O43414	337 aa	Known RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CHST1	O43916	411 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	TSPAN2	O60636	221 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	BCAS2	O75934	225 aa	Predicted RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	GAS8-AS1	O95177	125 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	WNT2	P09544	360 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ALDOC	P09972	364 aa	Known RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	THRB	P10828	461 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CD1D	P15813	335 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CD22	P20273	847 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ME2	P23368	584 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CERS1	P27544	350 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	PSME3	P61289	254 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	PSPH	P78330	225 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	MRPS22	P82650	360 aa	Known RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	REEP5	Q00765	189 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	GK3P	Q14409	553 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	PDK3	Q15120	406 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	AGK	Q53H12	422 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ZNF678	Q5SXM1	525 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	IL23R	Q5VWK5	629 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	C16orf89	Q6UX73	402 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	LARP4	Q71RC2	724 aa	Known RBP eCLIP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	PIWIL3	Q7Z3Z3	882 aa	Known RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	GALNT7	Q86SF2	657 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ADAMTSL2	Q86TH1	951 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ISCA2	Q86U28	154 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	MYPOP	Q86VE0	399 aa	Predicted RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	LRRC28	Q86X40	367 aa	Predicted RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	LYPD6	Q86Y78	171 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	FUNDC1	Q8IVP5	155 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	KLHDC8A	Q8IYD2	350 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	PGAM4	Q8N0Y7	254 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM71E2	Q8N5Q1	922 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	SCCPDH	Q8NBX0	429 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	FAM156A	Q8NDB6	213 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	OR7G1	Q8NGA0	311 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	OR9I1	Q8NGQ6	314 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	SLC7A13	Q8TCU3	470 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	MAGEE2	Q8TD90	523 aa	Predicted RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	LPGAT1	Q92604	370 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	SLCO4A1	Q96BD0	722 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	L3HYPDH	Q96EM0	354 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	TSNARE1	Q96NA8	513 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	NSUN5	Q96P11	429 aa	Known RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	PCGF1	Q9BSM1	259 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CDADC1	Q9BWV3	514 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	SPNS1	Q9H2V7	528 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	ALG9	Q9H6U8	611 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	COQ10B	Q9H8M1	238 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	COPS7B	Q9H9Q2	264 aa	Predicted RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CXorf21	Q9HAI6	301 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	HINT3	Q9NQE9	182 aa	Known RBP	3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	MED11	Q9P086	117 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	GALP	Q9UBC7	116 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	CD300A	Q9UGN4	299 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	VWA7	Q9Y334	891 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	RNF11	Q9Y3C5	154 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772	FIS1	Q9Y3D6	152 aa		3.95	□□□□□ -1.78
MSI2-216	ENST00000582772		A0A0U1RQV1	116 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	TCRBV3S1	A0A5B6	114 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	PRORSD1P	A6NEY8	169 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	TRIM64C	A6NLI5	447 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	TRPC5OS	A6NMA1	111 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772		C9JVG2	144 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	UBXN8	O00124	270 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	MRAS	O14807	208 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	DENR	O43583	198 aa	Known RBP	3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	ENSA	O43768	121 aa	Known RBP	3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	PEX14	O75381	377 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	TOX4	O94842	621 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	SCEL	O95171	688 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	LY86	O95711	162 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	MT-ND5	P03915	603 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	ALDOB	P05062	364 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	RBP1	P09455	135 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	NPPB	P16860	134 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	IMPDH1	P20839	514 aa		3.94	□□□□□ -1.78
MSI2-216	ENST00000582772	ATP6V1B2	P21281	511 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms