RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 CDKN1AP38936 164 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NAAAQ02083 359 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ST3GAL3Q11203 375 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TNK1Q13470 666 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 RAB35Q15286 201 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NRN1LQ496H8 165 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 C8orf82Q6P1X6 216 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 B3GLCTQ6Y288 498 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 PIWIL3Q7Z3Z3 882 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SPATA21Q7Z572 469 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NANOGNBQ7Z5D8 188 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 TSPYL5Q86VY4 417 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SLC15A3Q8IY34 581 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 OR6N1Q8NGY5 312 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NANOS1Q8WY41 292 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 SLC25A44Q96H78 314 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 POM121Q96HA1 1249 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 EMC6Q9BV81 110 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 CACNG6Q9BXT2 260 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ULBP2Q9BZM5 246 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 NSRP1Q9H0G5 558 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ZNF442Q9H7R0 627 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 MOKQ9UQ07 419 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 POFUT2Q9Y2G5 429 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 MED31Q9Y3C7 131 aa10.96□□□□□ -0.65
CDK5RAP3-222ENST00000581708 ALPK2Q86TB3 2170 aa10.96□□□□□ -0.66
CDK5RAP3-222ENST00000581708 A0A096LPE4 126 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 A0A1W2PPZ6 126 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 B9A039 149 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 LRRN3E7EW58 273 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 RNF13O43567 381 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 LY6G6DO95868 133 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 TSPAN19P0C672 248 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CECR9P0C854 216 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 NR2C1P13056 603 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 IFNGR1P15260 489 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 PRDX6P30041 224 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 BIDP55957 195 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 EFNB3Q15768 340 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SWI5Q1ZZU3 235 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ANKDD1AQ495B1 522 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 LRRC23Q53EV4 343 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SLC35D2Q76EJ3 337 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CIARTQ8N365 385 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 TMEM239Q8WW34 195 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 TMEM54Q969K7 222 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ZNF566Q969W8 418 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SGTBQ96EQ0 304 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 PRRC1Q96M27 445 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 FOXB1Q99853 325 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 RHNO1Q9BSD3 238 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 MEPEQ9NQ76 525 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CA10Q9NS85 328 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 MED29Q9NX70 200 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CMTM6Q9NX76 183 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 B3GNT2Q9NY97 397 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 GLTPQ9NZD2 209 aa10.95□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ABCA2Q9BZC7 2435 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 A0A1W2PRG6 482 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 C11orf98E9PRG8 122 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 OR7A10O76100 309 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 UBL3O95164 117 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 BCL10O95999 233 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 IGHG1P01857 330 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 IFNW1P05000 195 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 UMPSP11172 480 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 FUT1P19526 365 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ACVR1BP36896 505 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SERPINF1P36955 418 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 EFNA4P52798 201 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 NUDT6P53370 316 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SNRPD2P62316 118 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 LIPEQ05469 1076 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SF3A3Q12874 501 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■□□□ 14.1
CDK5RAP3-222ENST00000581708 PIN1Q13526 163 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CAMK2DQ13557 499 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 TAF11Q15544 211 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 GSG1Q2KHT4 349 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 PHYHD1Q5SRE7 291 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CARD17Q5XLA6 110 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 CLEC2AQ6UVW9 174 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ZNF813Q6ZN06 617 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 DEF8Q6ZN54 512 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SLC46A3Q7Z3Q1 461 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 LSRQ86X29 649 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 RNF113BQ8IZP6 322 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 OR10H5Q8NGA6 315 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 GEMIN6Q8WXD5 167 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ZNF837Q96EG3 531 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SEPHS2Q99611 448 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 SMR3AQ99954 134 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 MYLK2Q9H1R3 596 aa10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 MYOZ1Q9NP98 299 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-222ENST00000581708 ABCD2Q9UBJ2 740 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms