RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 APH1AQ96BI3 265 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 L3HYPDHQ96EM0 354 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 PPP3R2Q96LZ3 170 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 TNFRSF13CQ96RJ3 184 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 ZNF347Q96SE7 839 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 ABHD14AQ9BUJ0 271 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 TMEM109Q9BVC6 243 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 GPR174Q9BXC1 333 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 PRRG4Q9BZD6 226 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 NAT10Q9H0A0 1025 aaKnown RBP3.56□□□□□ -1.84
SMG8-205ENST00000580798 KAT8Q9H7Z6 458 aaKnown RBP3.56□□□□□ -1.84
SMG8-205ENST00000580798 MAP6D1Q9H9H5 199 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 POPDC2Q9HBU9 364 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 ZDHHC4Q9NPG8 344 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 IFT46Q9NQC8 304 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 GSN-AS1Q9NRJ2 163 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 CYSLTR2Q9NS75 346 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
SMG8-205ENST00000580798 IMPAD1Q9NX62 359 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 ELF5Q9UKW6 265 aaPredicted RBP3.56□□□□□ -1.84
SMG8-205ENST00000580798 ABT1Q9ULW3 272 aaKnown RBP3.56□□□□□ -1.84
SMG8-205ENST00000580798 B3GNT3Q9Y2A9 372 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 CEPT1Q9Y6K0 416 aa3.56□□□□□ -1.84
SMG8-205ENST00000580798 C9orf84Q5VXU9 1444 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 KIF26BQ2KJY2 2108 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ARHGEF10O15013 1369 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 RNF222A6NCQ9 220 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 EFCAB9A8MZ26 197 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR11H12B2RN74 326 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 NEDD8-MDP1E9PL57 170 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CDC7O00311 574 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 KLRC4O43908 158 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CCDC22O60826 627 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ZNF217O75362 1048 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR2B3O76000 313 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 RGS11O94810 467 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 LRATO95237 230 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 PAPSS2O95340 614 aaPredicted RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 GOT2P00505 430 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 IFNGP01579 166 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 HLA-DQA2P01906 255 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 NR3C1P04150 777 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CSN3P07498 182 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR10J4P0C629 311 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 C1GALT1C1LP0DN25 315 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 HIST1H1CP16403 213 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 EPCAMP16422 314 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ATP6V1B2P21281 511 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 PAX6P26367 422 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 IVDP26440 423 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 NMBRP28336 390 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 SDC4P31431 198 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 SHMT2P34897 504 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 GPX4P36969 197 aaPredicted RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 RPL13AP40429 203 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 MATKP42679 507 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 RPL5P46777 297 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR3A1P47881 315 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CSNK1A1P48729 337 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CX3CR1P49238 355 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 HLCSP50747 726 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 DAP3P51398 398 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 NOVA1P51513 510 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 CAV2P51636 162 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 GAS1P54826 345 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ADPRHP54922 357 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR2B8PP59922 312 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ERVK-8P63133 956 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 IRF4Q15306 451 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ZBTB6Q15916 424 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 DGUOKQ16854 277 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ASPRV1Q53RT3 343 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 TNFAIP8L3Q5GJ75 292 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 SYPL2Q5VXT5 272 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ZNF770Q6IQ21 691 aaPredicted RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 DRAM2Q6UX65 266 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 SLC16A12Q6ZSM3 486 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 TPRG1Q6ZUI0 275 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CPEB2Q7Z5Q1 589 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 TMEM144Q7Z5S9 345 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 DHDDSQ86SQ9 333 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 GPSM1Q86YR5 675 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 C10orf107Q8IVU9 208 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 WDFY1Q8IWB7 410 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ZBTB8OSQ8IWT0 167 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 CTAGE3PQ8IX95 158 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 ZC3H3Q8IXZ2 948 aaKnown RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 LGI2Q8N0V4 545 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 SDR9C7Q8NEX9 313 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR11H1Q8NG94 326 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR52N4Q8NGI2 321 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR11H2Q8NH07 326 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 OR52I2Q8NH67 350 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 C2CD4CQ8TF44 421 aa3.55□□□□□ -1.84
SMG8-205ENST00000580798 RERGQ96A58 199 aaPredicted RBP3.55□□□□□ -1.84
SMG8-205ENST00000580798 PYCR2Q96C36 320 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms