RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ING1Q9UK53 422 aaPredicted RBP13.79□□□□□ -0.2
SS18-216ENST00000580751 PROCRQ9UNN8 238 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 HIF3AQ9Y2N7 669 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 GMPPBQ9Y5P6 360 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 CACNA1CQ13936 2221 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 EEF1E1-BLOC1S5C9J1V9 151 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 LRRN3E7EW58 273 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 EEF1E1O43324 174 aaKnown RBP13.78□□□□□ -0.2
SS18-216ENST00000580751 IDH3BO43837 385 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 NDUFB2O95178 105 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 OR6A2O95222 327 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 CD8BP10966 210 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 SLC6A6P31641 620 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 GGT2P36268 569 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 PUDPQ08623 228 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 ZNF691Q5VV52 312 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 VWA1Q6PCB0 445 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 C8orf59Q8N0T1 100 aaPredicted RBP13.78□□□□□ -0.2
SS18-216ENST00000580751 RELL2Q8NC24 303 aaPredicted RBP13.78□□□□□ -0.2
SS18-216ENST00000580751 OR2T33Q8NG76 320 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 OR9K2Q8NGE7 335 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 STARD4Q96DR4 205 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 LRRC46Q96FV0 321 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 NR1H4Q96RI1 486 aaPredicted RBP13.78□□□□□ -0.2
SS18-216ENST00000580751 GPX7Q96SL4 187 aaPredicted RBP13.78□□□□□ -0.2
SS18-216ENST00000580751 FANCFQ9NPI8 374 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
SS18-216ENST00000580751 LOC102725191A0A1B0GVB3 256 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 M0R3G1 203 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 PLPP3O14495 311 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 MSTNO14793 375 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 SMNDC1O75940 238 aaKnown RBP eCLIP13.77□□□□□ -0.21
SS18-216ENST00000580751 ZNF43P17038 809 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 POLR2IP36954 125 aaKnown RBP13.77□□□□□ -0.21
SS18-216ENST00000580751 ASCL1P50553 236 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 ZP4Q12836 540 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 C12orf73Q69YU5 71 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 CASP12Q6UXS9 341 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 DPY19L2P2Q6ZN68 376 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 BTLAQ7Z6A9 289 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 THAP5Q7Z6K1 395 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 KIF18BQ86Y91 864 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 FANK1Q8TC84 345 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 OXGR1Q96P68 337 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 SLC38A2Q96QD8 506 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 YTHDF1Q9BYJ9 559 aaKnown RBP13.77□□□□□ -0.21
SS18-216ENST00000580751 OR52D1Q9H346 318 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 PARPBPQ9NWS1 579 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 NOSIPQ9Y314 301 aaKnown RBP13.77□□□□□ -0.21
SS18-216ENST00000580751 DOPEY2Q9Y3R5 2298 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 KLF2Q9Y5W3 355 aaPredicted RBP13.77□□□□□ -0.21
SS18-216ENST00000580751 FLVCR1Q9Y5Y0 555 aa13.77□□□□□ -0.21
SS18-216ENST00000580751 ANKHD1Q8IWZ3 2542 aaKnown RBP13.77□□□□□ -0.21
SS18-216ENST00000580751 NPIPB13A6NJU9 1138 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 NPIPB4C9JG80 1138 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 IMPA2O14732 288 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 ARPC3O15145 178 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 CGAP01215 116 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 ADORA3P0DMS8 318 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 UQCRC1P31930 480 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 GRK5P34947 590 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 CSNK2BP67870 215 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 FHL1Q13642 323 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 C1DQ13901 141 aaKnown RBP13.76□□□□□ -0.21
SS18-216ENST00000580751 GINS1Q14691 196 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 CDSNQ15517 529 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 FBXL19-AS1Q494R0 122 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 SLC25A30Q5SVS4 291 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 KRT80Q6KB66 452 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 PXKQ7Z7A4 578 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 UEVLDQ8IX04 471 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 LNX2Q8N448 690 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 LRRC17Q8N6Y2 441 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 OR13C2Q8NGS9 318 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 FBLIM1Q8WUP2 373 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 TMEM45BQ96B21 275 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 MUS81Q96NY9 551 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 TNFRSF13CQ96RJ3 184 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 TSSK6Q9BXA6 273 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 C12orf49Q9H741 205 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 MCCC2Q9HCC0 563 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 PLSCR4Q9NRQ2 329 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 JKAMPQ9P055 326 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 B3GAT1Q9P2W7 334 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 NOX1Q9Y5S8 564 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
SS18-216ENST00000580751 NKX2-6A6NCS4 301 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 MS4A18H0YCH9 400 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 AKAP8O43823 692 aaKnown RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 MRPL33O75394 65 aaKnown RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 SOX14O95416 240 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 AHCYP23526 432 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 POU1F1P28069 291 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 EPHA2P29317 976 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 CXCR4P61073 352 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 ISL1P61371 349 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 SNRPGP62308 76 aaKnown RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 POU3F1Q03052 451 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms