RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 EFCAB7A8K855 629 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 F5H5P2 479 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 G3V3Q6 166 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DVL2O14641 736 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ARPC1BO15143 372 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 MID1O15344 667 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SNRNP200O75643 2136 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 RBBP9O75884 186 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 GLCEO94923 617 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 NKX2-2O95096 273 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 GPR75O95800 540 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 TIMP1P01033 207 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 HIST1H2ABP04908 130 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ANKRD34CP0C6C1 535 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ACSM4P0C7M7 580 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 UBBP0CG47 229 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 UBCP0CG48 685 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 SMIM10L1P0DMW3 83 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 IL9P15248 144 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 CSF2RAP15509 400 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 RPA2P15927 270 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DPP4P27487 766 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 AGTR1P30556 359 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DRD3P35462 400 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 MAP3K8P41279 467 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 CENPAP49450 140 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 VEGFCP49767 419 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SELENOPP49908 381 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ACTBP60709 375 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SEC61A1P61619 476 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 RPS11P62280 158 aaKnown RBP eCLIP4.83□□□□□ -1.64
CDH8-206ENST00000580044 RPS27AP62979 156 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 UBA52P62987 128 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 ACTG1P63261 375 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 CRYZQ08257 329 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 FGL1Q08830 312 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 RASGEF1BQ0VAM2 473 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 HTR4Q13639 388 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 GK2Q14410 553 aaPredicted RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 ZNF267Q14586 743 aaPredicted RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 CST6Q15828 149 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 Q499Y3 187 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 TP53I3Q53FA7 332 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ALG10BQ5I7T1 473 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 AGBL4Q5VU57 503 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ZNF776Q68DI1 518 aaPredicted RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 FCRL6Q6DN72 434 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SLC25A25Q6KCM7 469 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 LPCAT3Q6P1A2 487 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 FAM199XQ6PEV8 388 aaPredicted RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 APOOLQ6UXV4 268 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DNM1P46Q6ZS02 220 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 HIST3H2AQ7L7L0 130 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SLC16A9Q7RTY1 509 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 NUP54Q7Z3B4 507 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 VN1R4Q7Z5H5 301 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 GRASPQ7Z6J2 395 aaPredicted RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 GLRX5Q86SX6 157 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 GLB1L2Q8IW92 636 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 PDZD9Q8IXQ8 264 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 CCDC36Q8IYA8 594 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 PM20D2Q8IYS1 436 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DNAAF1Q8NEP3 725 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 OR6C4Q8NGE1 309 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 OR52E2Q8NGJ4 325 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 OR6N1Q8NGY5 312 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 OR51A7Q8NH64 312 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ADAMTS18Q8TE60 1221 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 THEM6Q8WUY1 208 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ASB12Q8WXK4 309 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 HIST1H2ACQ93077 130 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 PNPLA2Q96AD5 504 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SLC25A38Q96DW6 304 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 RSPRY1Q96DX4 576 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ELMOD3Q96FG2 381 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SMIM10Q96HG1 83 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 CCDC140Q96MF4 163 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SFXN2Q96NB2 322 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DEFB118Q96PH6 123 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DERL3Q96Q80 235 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 OR2M4Q96R27 311 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DDOQ99489 341 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 PELOQ9BRX2 385 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 LMF2Q9BU23 707 aaKnown RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 COMMD4Q9H0A8 199 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 DNTTIP1Q9H147 329 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 OR10A4Q9H209 315 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SLC25A32Q9H2D1 315 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SLCO5A1Q9H2Y9 848 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 SRMSQ9H3Y6 488 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 LDAHQ9H6V9 325 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 MCCC2Q9HCC0 563 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 ZDHHC4Q9NPG8 344 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 NOX4Q9NPH5 578 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 MEPEQ9NQ76 525 aaPredicted RBP4.83□□□□□ -1.64
CDH8-206ENST00000580044 C12orf4Q9NQ89 552 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 RXFP3Q9NSD7 469 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 KCMF1Q9P0J7 381 aa4.83□□□□□ -1.64
CDH8-206ENST00000580044 NCDNQ9UBB6 729 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms