RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 HOXD1Q9GZZ0 328 aa4.84□□□□□ -1.63
CCDC178-209ENST00000579947 UGDHO60701 494 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 UBL3O95164 117 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 SNAP29O95721 258 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 SERPINA5P05154 406 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 ELK3P41970 407 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 CEACAM16Q2WEN9 425 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 VPS26BQ4G0F5 336 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 DCDC5Q6ZRR9 648 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 CREB3L2Q70SY1 520 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 L3MBTL4Q8NA19 623 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 ITLN1Q8WWA0 313 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 TUBGCP3Q96CW5 907 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 CCDC106Q9BWC9 280 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 SLC19A3Q9BZV2 496 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 C19orf73Q9NVV2 129 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 ZNF224Q9NZL3 707 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 ACOT9Q9Y305 439 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 KIAA2026Q5HYC2 2103 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 TRBV23-1A0A0A0MS06 115 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 GTPBP1O00178 669 aaKnown RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 ACP2P11117 423 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 FSTP19883 344 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 SAA4P35542 130 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 UCP2P55851 309 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 TAS2R39P59534 338 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 CNN3Q15417 329 aaKnown RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 NDUFAF6Q330K2 333 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 HSP90AA5PQ58FG0 334 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 MBNL2Q5VZF2 373 aaKnown RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 AADACL2Q6P093 401 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 TMEM107Q6UX40 140 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 C4orf22Q6V702 233 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 COMMD6Q7Z4G1 85 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PAQR4Q8N4S7 273 aaPredicted RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 MMGT1Q8N4V1 131 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PMM1Q92871 262 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 DMRTB1Q96MA1 342 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 ASPNQ9BXN1 380 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 C1orf198Q9H425 327 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 SLC35C2Q9NQQ7 365 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 NANSQ9NR45 359 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 DDX18Q9NVP1 670 aaKnown RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 H3BSA7 217 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 K7EPI3 171 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 AHSGP02765 367 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PSMB10P40306 273 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 BMXP51813 675 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 RAB1AP62820 205 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PIGFQ07326 219 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 SELPLGQ14242 412 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 RASA2Q15283 850 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 RNLSQ5VYX0 342 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PRUNE1Q86TP1 453 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 EPHX4Q8IUS5 362 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 MAIP1Q8WWC4 291 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 EXOSC8Q96B26 276 aaKnown RBP4.83□□□□□ -1.64
CCDC178-209ENST00000579947 OR5M11Q96RB7 305 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 CDH20Q9HBT6 801 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 CTPS2Q9NRF8 586 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 PPP1R3CQ9UQK1 317 aa4.83□□□□□ -1.64
CCDC178-209ENST00000579947 APOBP04114 4563 aaKnown RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 SHOXO15266 292 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 ZNF264O43296 627 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 IFNB1P01574 187 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 TSPAN8P19075 237 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 TNFSF4P23510 183 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 GIPRP48546 466 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 ARF6P62330 175 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 ACSM1Q08AH1 577 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 LYPD2Q6UXB3 125 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 VRK2Q86Y07 508 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 SLC30A7Q8NEW0 376 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 THUMPD3Q9BV44 507 aaKnown RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 MRPL1Q9BYD6 325 aaKnown RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 OR11A1Q9GZK7 315 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 HSD3B7Q9H2F3 369 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 SIRT7Q9NRC8 400 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 TBCCD1Q9NVR7 557 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 PCDHGB4Q9UN71 923 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 PACSIN2Q9UNF0 486 aaPredicted RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 TACR3P29371 465 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 MPV17P39210 176 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 PRKAG1P54619 331 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 TBX2Q13207 712 aaPredicted RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 LAPTM4AQ15012 233 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 ZNF718Q3SXZ3 478 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 CDONQ4KMG0 1287 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 EXOSC6Q5RKV6 272 aaKnown RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 PIGWQ7Z7B1 504 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 CENPVQ7Z7K6 275 aaPredicted RBP4.82□□□□□ -1.64
CCDC178-209ENST00000579947 CDRT4Q8N9R6 151 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 OR5M8Q8NGP6 311 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 RFWD2Q8NHY2 731 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 PIFOQ8TCI5 191 aa4.82□□□□□ -1.64
CCDC178-209ENST00000579947 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms