RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
SS18-212ENST00000579061 IGKV3-15P01624 115 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 IGLV1-44P01699 117 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 INHBBP09529 407 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 IFNGR1P15260 489 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 CBR1P16152 277 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 FUT1P19526 365 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 BIDP55957 195 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 CAMK2DQ13557 499 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 PHYHD1Q5SRE7 291 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 CARD17Q5XLA6 110 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 B3GLCTQ6Y288 498 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 NANOGNBQ7Z5D8 188 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 PIGWQ7Z7B1 504 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 BIVMQ86UB2 503 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 FBXL14Q8N1E6 418 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 LRRC17Q8N6Y2 441 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 OR6N1Q8NGY5 312 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 TMEM255BQ8WV15 326 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
SS18-212ENST00000579061 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 KCTD14Q9BQ13 255 aaPredicted RBP12.94□□□□□ -0.34
SS18-212ENST00000579061 KCNS3Q9BQ31 491 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 KATNB1Q9BVA0 655 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 ULBP2Q9BZM5 246 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 SPAG4Q9NPE6 437 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 CBLN4Q9NTU7 201 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 A4GNTQ9UNA3 340 aa12.94□□□□□ -0.34
SS18-212ENST00000579061 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 FAM171A2A8MVW0 826 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 CENPBD1B2RD01 187 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 SERPINI2O75830 405 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 CRYAAP02489 173 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 IFNW1P05000 195 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 APOBEC3AP31941 199 aaPredicted RBP12.93□□□□□ -0.34
SS18-212ENST00000579061 ARR3P36575 388 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 CDKN1AP38936 164 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 CSNK1A1P48729 337 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 FABP6P51161 128 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 C11orf71Q6IPW1 123 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 HDDC2Q7Z4H3 204 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 VTCN1Q7Z7D3 282 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 OFCC1Q8IZS5 231 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 MUC15Q8N387 334 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 PFN4Q8NHR9 129 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 TMEM54Q969K7 222 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 SLC25A44Q96H78 314 aaPredicted RBP12.93□□□□□ -0.34
SS18-212ENST00000579061 COX4I2Q96KJ9 171 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 MOKQ9UQ07 419 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 POFUT2Q9Y2G5 429 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 ARL2BPQ9Y2Y0 163 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 ATP23Q9Y6H3 246 aa12.93□□□□□ -0.34
SS18-212ENST00000579061 A0A1W2PRG6 482 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 NPIPB13A6NJU9 1138 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 NPIPB4C9JG80 1138 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 ATP6V1G2-DDX39BF2Z307 99 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 BLOC1S5-TXNDC5H3BN57 136 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 ENTPD5O75356 428 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 ZNF682O95780 498 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 BCL10O95999 233 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 SERPINA1P01009 418 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 CECR9P0C854 216 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 GYS2P54840 703 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 NAAAQ02083 359 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 RPL18Q07020 188 aaKnown RBP12.92□□□□□ -0.34
SS18-212ENST00000579061 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 IL17RDQ8NFM7 739 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 FAM162AQ96A26 154 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 FOXB1Q99853 325 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 DENND2DQ9H6A0 471 aaPredicted RBP12.92□□□□□ -0.34
SS18-212ENST00000579061 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
SS18-212ENST00000579061 C20orf141Q9NUB4 165 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 B3GNT2Q9NY97 397 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 GLTPQ9NZD2 209 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 STX18Q9P2W9 335 aaKnown RBP12.92□□□□□ -0.34
SS18-212ENST00000579061 RPS6KA6Q9UK32 745 aa12.92□□□□□ -0.34
SS18-212ENST00000579061 DYNC1I1O14576 645 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 DCTN3O75935 186 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 PGA4P0DJD7 388 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 PGA3P0DJD8 388 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 BMP4P12644 408 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 TUBA1BP68363 451 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 TUBA4AP68366 448 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 TRAM2Q15035 370 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 ANKDD1AQ495B1 522 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 ZNF813Q6ZN06 617 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 TUBA1AQ71U36 451 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 FKBP9P1Q75LS8 142 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 PIWIL3Q7Z3Z3 882 aaKnown RBP12.91□□□□□ -0.34
SS18-212ENST00000579061 RNF113BQ8IZP6 322 aaKnown RBP12.91□□□□□ -0.34
SS18-212ENST00000579061 ANKS4BQ8N8V4 417 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 OR4F15Q8NGB8 312 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 NANOS1Q8WY41 292 aaKnown RBP12.91□□□□□ -0.34
SS18-212ENST00000579061 HSH2DQ96JZ2 352 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 LRRC37BQ96QE4 947 aa12.91□□□□□ -0.34
SS18-212ENST00000579061 ANKRD19PQ9H560 264 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms