RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
IFT20-206ENST00000578122 SAMHD1Q9Y3Z3 626 aaKnown RBP13.56□□□□□ -0.24
IFT20-206ENST00000578122 CIB4A0PJX0 185 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 UNC119BA6NIH7 251 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 MCIDASD6RGH6 385 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 CASKO14936 926 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 KLF4O43474 513 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 CCNB2O95067 398 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 CST1P01037 141 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 ITGA5P08648 1049 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 DAP3P51398 398 aaKnown RBP13.55□□□□□ -0.24
IFT20-206ENST00000578122 CTXN1P60606 82 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 PRR20EP86478 221 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 PRR20CP86479 221 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 PRR20DP86480 221 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 PRR20BP86481 221 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 PRR20AP86496 221 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 PPP1R8Q12972 351 aaKnown RBP13.55□□□□□ -0.24
IFT20-206ENST00000578122 CCNIQ14094 377 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 MELKQ14680 651 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 C20orf196Q8IYI0 205 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 LINC00471Q8N535 108 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 LRRC75AQ8NAA5 344 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 OR6N1Q8NGY5 312 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 GNPDA2Q8TDQ7 276 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 SLCO4A1Q96BD0 722 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 ZC3HAV1LQ96H79 300 aaKnown RBP13.55□□□□□ -0.24
IFT20-206ENST00000578122 LRR1Q96L50 414 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 MCCC2Q9HCC0 563 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 U3KQV3 271 aa13.55□□□□□ -0.24
IFT20-206ENST00000578122 GNGT2O14610 69 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 PTP4A3O75365 173 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 RAD51DO75771 328 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 CSNK1A1P48729 337 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 PRPS1P60891 318 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
IFT20-206ENST00000578122 TGFBR3Q03167 851 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 DAZAP2Q15038 168 aaPredicted RBP13.54□□□□□ -0.24
IFT20-206ENST00000578122 TAF11Q15544 211 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 ACKR1Q16570 336 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 C1orf94Q6P1W5 598 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 PGBD2Q6P3X8 592 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 C22orf34Q6ZV56 151 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 LINGO2Q7L985 606 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 HDDC2Q7Z4H3 204 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
IFT20-206ENST00000578122 IGFN1Q86VF2 1251 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 ASB10Q8WXI3 467 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 C14orf79Q96F83 325 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
IFT20-206ENST00000578122 GPA33Q99795 319 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 TXNIPQ9H3M7 391 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 B3GAT2Q9NPZ5 323 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 ZNF226Q9NYT6 803 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
IFT20-206ENST00000578122 UTP20O75691 2785 aaKnown RBP13.54□□□□□ -0.24
IFT20-206ENST00000578122 NPIPB13A6NJU9 1138 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 NPIPB4C9JG80 1138 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 RPL36A-HNRNPH2H7BZ11 118 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 M0R3G1 203 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 NDUFB2O95178 105 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 THBDP07204 575 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 ZNF26P17031 533 aaPredicted RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 FPR3P25089 353 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 SSTR2P30874 369 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 RPL4P36578 427 aaKnown RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 GSSP48637 474 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 GABPB1Q06547 395 aaPredicted RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 GK3PQ14409 553 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 STK11Q15831 433 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 GABRA6Q16445 453 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 MICAQ29983 383 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 PHYHD1Q5SRE7 291 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 ARMC4Q5T2S8 1044 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 OR7E24Q6IFN5 339 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 P2RY8Q86VZ1 359 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 WFDC8Q8IUA0 241 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 C1orf162Q8NEQ5 155 aaPredicted RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 OR9Q2Q8NGE9 314 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 HSD17B8Q92506 261 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 ZNF566Q969W8 418 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 SLC25A44Q96H78 314 aaPredicted RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 STX18Q9P2W9 335 aaKnown RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 DNAJB9Q9UBS3 223 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 FLNBO75369 2602 aaKnown RBP13.53□□□□□ -0.24
IFT20-206ENST00000578122 COL12A1Q99715 3063 aa13.53□□□□□ -0.24
IFT20-206ENST00000578122 OR5H1A6NKK0 313 aa13.52□□□□□ -0.25
IFT20-206ENST00000578122 A6NNC1 897 aa13.52□□□□□ -0.25
IFT20-206ENST00000578122 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
IFT20-206ENST00000578122 TIPRLO75663 272 aa13.52□□□□□ -0.25
IFT20-206ENST00000578122 IGHG1P01857 330 aa13.52□□□□□ -0.25
IFT20-206ENST00000578122 IGHMP01871 453 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms