RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 SNX13Q9Y5W8 968 aa12.21□□□□□ -0.45
GGA3-203ENST00000577435 ZNF99A8MXY4 864 aaPredicted RBP12.2□□□□□ -0.46
GGA3-203ENST00000577435 C11orf98E9PRG8 122 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 OVOL3O00110 214 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 ARHGEF9O43307 516 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 RNF13O43567 381 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 GMNNO75496 209 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 UMPSP11172 480 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 NCK1P16333 377 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 TRAM2Q15035 370 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 PGGHGQ32M88 737 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 SAMD4BQ5PRF9 694 aaKnown RBP12.2□□□□□ -0.46
GGA3-203ENST00000577435 PHYHD1Q5SRE7 291 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 C16orf89Q6UX73 402 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 NANOGNBQ7Z5D8 188 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 TSEN54Q7Z6J9 526 aaKnown RBP12.2□□□□□ -0.46
GGA3-203ENST00000577435 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 DEPDC4Q8N2C3 294 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 FITM2Q8N6M3 262 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 TMEM54Q969K7 222 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 CDRT15Q96T59 188 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 C1QTNF6Q9BXI9 259 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 ANKRD19PQ9H560 264 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 CXorf56Q9H5V9 222 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 B3GAT2Q9NPZ5 323 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 SAMD4AQ9UPU9 718 aaKnown RBP12.2□□□□□ -0.46
GGA3-203ENST00000577435 ENPP4Q9Y6X5 453 aa12.2□□□□□ -0.46
GGA3-203ENST00000577435 CENPBD1B2RD01 187 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 BLOC1S5-TXNDC5H3BN57 136 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 J3KTA2 159 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 M0R1B8 84 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 M0R3G1 203 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 BCL10O95999 233 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 IGLV1-44P01699 117 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 FUT4P22083 530 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 YAP1P46937 504 aaKnown RBP12.19□□□□□ -0.46
GGA3-203ENST00000577435 BIDP55957 195 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 UBE2NP61088 152 aaKnown RBP12.19□□□□□ -0.46
GGA3-203ENST00000577435 PRKCDQ05655 676 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 RPL18Q07020 188 aaKnown RBP12.19□□□□□ -0.46
GGA3-203ENST00000577435 CAMK2DQ13557 499 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 ANKDD1AQ495B1 522 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 CARD17Q5XLA6 110 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 DTX2Q86UW9 622 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 CYP4Z1Q86W10 505 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 RNF148Q8N7C7 305 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 CCDC197Q8NCU1 140 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 OR6N1Q8NGY5 312 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
GGA3-203ENST00000577435 BPIFA2Q96DR5 249 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 SLC25A44Q96H78 314 aaPredicted RBP12.19□□□□□ -0.46
GGA3-203ENST00000577435 NSL1Q96IY1 281 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 C7orf34Q96L11 122 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 SEPHS2Q99611 448 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 GLTPQ9NZD2 209 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 MAGEL2Q9UJ55 1249 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 ADAM21Q9UKJ8 722 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 LAMP3Q9UQV4 416 aa12.19□□□□□ -0.46
GGA3-203ENST00000577435 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 A0A096LPE4 126 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 A0A1W2PPZ6 126 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 NPIPB13A6NJU9 1138 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 NPIPB4C9JG80 1138 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 E7EQL1 145 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 SERPINI2O75830 405 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 IGKV3-15P01624 115 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 CD8AP01732 235 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 SOD3P08294 240 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 CD99P14209 185 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 CBR1P16152 277 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 RHCEP18577 417 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 AQP2P41181 271 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 CSNK1A1P48729 337 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 CDH11P55287 796 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 RPS4XP62701 263 aaKnown RBP12.18□□□□□ -0.46
GGA3-203ENST00000577435 HIST3H3Q16695 136 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 SLC22A25Q6T423 547 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 WFDC11Q8NEX6 87 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 ZNF566Q969W8 418 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 SLC38A2Q96QD8 506 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 DHRS9Q9BPW9 319 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 MRPL13Q9BYD1 178 aaKnown RBP12.18□□□□□ -0.46
GGA3-203ENST00000577435 ULBP2Q9BZM5 246 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 NMNAT1Q9HAN9 279 aaPredicted RBP12.18□□□□□ -0.46
GGA3-203ENST00000577435 INIPQ9NRY2 104 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 FAIMQ9NVQ4 179 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 NDUFAF4Q9P032 175 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 RHCGQ9UBD6 479 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 POFUT2Q9Y2G5 429 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 HIF3AQ9Y2N7 669 aa12.18□□□□□ -0.46
GGA3-203ENST00000577435 A0A087WUU8 490 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 A0A1W2PRG6 482 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 A0A1W2PRQ8 180 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 B2RBV5 119 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 PIP5K1CO60331 668 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 PGA4P0DJD7 388 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 PGA3P0DJD8 388 aa12.17□□□□□ -0.46
GGA3-203ENST00000577435 IFI30P13284 250 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms